Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120162.Seq
(813 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6) 34 0.16
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 32 0.48
SB_34466| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.64
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3) 31 1.1
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_4274| Best HMM Match : LRV (HMM E-Value=5.7) 31 1.5
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 30 2.6
SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 29 4.5
SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6) 29 4.5
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 29 5.9
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 29 5.9
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 7.8
SB_34049| Best HMM Match : PSI (HMM E-Value=2.6) 28 7.8
SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
Length = 288
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 390 CARICT*N-CACCI*MNPI*RCATIVGRLC 304
CAR T N CACC+ MN RC T+ G C
Sbjct: 244 CARCVTMNGCACCVTMNGYPRCVTMNGCAC 273
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 390 CARICT*N-CACCI*MNPI*RCATIVGRLC 304
CAR T N CA C+ MN RC T+ G C
Sbjct: 226 CARCVTMNGCARCVTMNGCARCVTMNGCAC 255
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 432 CKNLLHC-RILRSCRCARICT*N-CACCI*MNPI*RCATIVG 313
C + C R + CAR T N CA C+ MN RC T+ G
Sbjct: 193 CVTIYDCARCVTMNGCARCVTMNGCARCVTMNGCARCVTMNG 234
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 384 VHNDTNAKFYNVIDFCKG---LEIAHDDILDCNWDSDQVYHLN 503
+H++ N N F K L +A +LDC W + +VYH N
Sbjct: 19 IHHNKNTDDNNNNSFVKKGELLNLAEQQLLDCTWSTPEVYHGN 61
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 384 VHNDTNAKFYNVIDF---CKGLEIAHDDILDCNWDSDQVYHLN 503
+H++ N N F C+ L +A +LDC W + VYH N
Sbjct: 25 IHHNKNTDDNNNNSFVKKCELLNLAEQQLLDCTWSTPGVYHGN 67
>SB_34466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/50 (22%), Positives = 22/50 (44%)
Frame = -1
Query: 582 NNPCLVANNAPNELRSRLDFCL*KIFRLNGKLDRCPNCNQVCRRAQFQDL 433
NNP + P + C+ + + G D+CP CN ++ +++
Sbjct: 135 NNPEITTQQTPENTETANSRCIERWLKAKGGSDKCPQCNAPAKKKDIRNI 184
>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
Length = 260
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Frame = -1
Query: 480 CPNCNQVCRRAQFQDL--CKNLLHC-RILRSCRCARICT*N-CACCI*MNPI*RCATIVG 313
C N R D C + C R + CAR T N CA C+ MN RC T+ G
Sbjct: 183 CVTMNGCARCVTMNDCARCVTIYDCARCVTMNGCARCVTMNGCARCVTMNGYPRCVTMNG 242
Query: 312 RLC 304
C
Sbjct: 243 CTC 245
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 384 VHNDTNAKFYNVIDFCKG---LEIAHDDILDCNWDSDQVYHLN 503
+H++ N N F K L +A +LDC W + VYH N
Sbjct: 168 IHHNKNTDDNNNNSFVKKGELLNLAEQQLLDCTWSTPGVYHGN 210
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 384 VHNDTNAKFYNVIDFCKG---LEIAHDDILDCNWDSDQVYHLN 503
+H++ N N F K L +A +LDC W + VYH N
Sbjct: 44 IHHNKNTDDNNNNSFVKKGELLNLAEQQLLDCTWSTPGVYHGN 86
>SB_4274| Best HMM Match : LRV (HMM E-Value=5.7)
Length = 327
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 348 FKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDDILDCNWDSDQVYHLNEIFFT 518
F C KYRY D K+ +++ F + E W +D+VY + F+T
Sbjct: 93 FNCLIKELKYRYTKQDVEIKWKSLLKFYR-QEHEKAQHKPSGWGTDEVYQSSWEFYT 148
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 432 CKNLLHC-RILRSCRCARICT*N-CACCI*MNPI*RCATIVG 313
C + C R + CAR T N CA C+ MN RC TI G
Sbjct: 687 CVTIYECARCVTMNGCARCVTMNGCARCVTMNGCARCVTING 728
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = -1
Query: 483 RCPNCNQVCRRAQFQDL--CKNLLHC-RILRSCRCARICT*N-CACCI*MNPI*RCATIV 316
RC N R + C + C R + CAR T N CA C+ +N RC T+
Sbjct: 677 RCVTMNGCARCVTIYECARCVTMNGCARCVTMNGCARCVTMNGCARCVTINGYPRCVTMN 736
Query: 315 GRLC 304
G C
Sbjct: 737 GCTC 740
>SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -1
Query: 483 RCPNCNQVCRRAQFQDL--CKNLLHC-RILRSCRCARICT*N-CACCI*MNPI*RCATIV 316
RC N R D C + C R + C R T N CA C+ MN RC T+
Sbjct: 459 RCVTMNGCARCVTIYDCARCVTMNGCARCVTMNGCPRCVTMNGCAHCVTMNGYPRCVTMN 518
Query: 315 GRLC 304
G C
Sbjct: 519 GCTC 522
>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 390 CARICT*N-CACCI*MNPI*RCATIVGRLC 304
CAR T N CA C+ MN RC T+ G C
Sbjct: 216 CARCVTMNGCARCVTMNGCPRCVTMNGCTC 245
>SB_15426| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 390 CARICT*N-CACCI*MNPI*RCATIVG 313
CAR T N CA C+ MN RC TI G
Sbjct: 189 CARCVTMNGCARCVTMNGCARCVTIYG 215
>SB_2503| Best HMM Match : Kunitz_BPTI (HMM E-Value=4.6)
Length = 224
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 390 CARICT*N-CACCI*MNPI*RCATIVG 313
CAR T N CA C+ MN RC TI G
Sbjct: 189 CARCVTMNGCARCVTMNGCARCVTIYG 215
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 438 LEIAHDDILDCNWDSDQVYHLN 503
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 438 LEIAHDDILDCNWDSDQVYHLN 503
L +A +LDC W + VYH N
Sbjct: 5 LNLAEQQLLDCTWSTPGVYHGN 26
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 501 LNGKLDRCPNCNQVCRRAQFQDLCKNLLHCRILRSCRCA-RICT*NCACCI*MNPI*RCA 325
LNG RC VC + + + KN L C +L S C I NC+C I RC
Sbjct: 404 LNGATSRCTRPAIVCAIGRPRHMSKNFL-CYLLPSGTCVDGINGFNCSCFIGFTGE-RCE 461
Query: 324 TIVGRLCGTFCS 289
T + C+
Sbjct: 462 TNIDDCVSNTCN 473
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 587 ILMRLNFDNKSNALLHL--QTEGERDDLRDKIESVLKHVKKLNTNSEK 724
I+ +L+ ++ + A L Q + E+DDL+ K++ + K ++K N+E+
Sbjct: 4261 IVQQLSIESDAPAAQTLVQQLQQEKDDLKSKLDQLKKTLQKSEANAEE 4308
>SB_34049| Best HMM Match : PSI (HMM E-Value=2.6)
Length = 279
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 432 CKNLLHC-RILRSCRCARICT*N-CACCI*MNPI*RCATIVGRLC 304
C + C R + C R T N CA C+ MN RC T+ G C
Sbjct: 185 CVTIYGCARCVTMNGCVRCVTMNGCARCVTMNGCPRCVTMNGCTC 229
>SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 38 LDALTLQYWPDVDRDIFCNVNKQIRAPYSYNYKGTKFSRCITKELLDKLK 187
L ++ Q WP+V D+ ++ ++ +KG + KE++ K+K
Sbjct: 519 LKSIIRQGWPEVKDDVPVSIRDELSLQNGLVFKGERLEGKTAKEVMRKIK 568
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,174,100
Number of Sequences: 59808
Number of extensions: 469997
Number of successful extensions: 1604
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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