Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120162.Seq
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 1.7
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 1.7
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 30 2.3
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z83105-8|CAB05488.1| 496|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical ... 28 6.9
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 9.1
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 9.1
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 665 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 552
A H Q AT+CF N+ T PAW +R
Sbjct: 263 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 300
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 665 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 552
A H Q AT+CF N+ T PAW +R
Sbjct: 408 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 445
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -1
Query: 483 RCPNCNQVCR-RAQFQDLCKNLLHCRILRSCRCARICT*NCA--CCI*MNPI*RCATIVG 313
+C C C+ + +L + +S +C C +C C + PI +CAT
Sbjct: 470 QCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQSCQQQCIQQLQPIQQCATACT 529
Query: 312 RLCGTFCS 289
+ C CS
Sbjct: 530 QSCSQSCS 537
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 471 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 355
C C R + C+ C R+C C R CT CC
Sbjct: 64 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 471 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 355
C C R + C+ C R+C C R CT CC
Sbjct: 66 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 471 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 355
C C R + C+ C R+C C R CT CC
Sbjct: 69 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 107
>Z83105-8|CAB05488.1| 496|Caenorhabditis elegans Hypothetical
protein F14H3.8 protein.
Length = 496
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 264 AEDRFDPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYN 416
+ED + P+ ++ I ++ W + S N H FK Y+H N K ++
Sbjct: 130 SEDFYTPETEEEKIIQLETWKNAT---SACTNNHDFKEFYLHYKKNLKIFS 177
>AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical
protein Y59C2A.2 protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +3
Query: 255 AIAAEDRFDPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVI 422
A+A +DP + +YH ++ +H ++ K +Y Y++ A Y V+
Sbjct: 233 ALATMKHYDPVEELEYHDPLEAEAHAAYFEHVKGRPEPQEYEYLYRVEYAMLYGVL 288
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -2
Query: 677 QFCRANHHARLQFEGAATRCFCCQNLTASKFSTTPAWS 564
++C N H Q + C C N S FS P S
Sbjct: 1265 EYCFRNSHCESQRQCLKNVCKCASNFVQSSFSCVPRMS 1302
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 5 RLYIPHMQ-DSNLDALTLQYWPDVDRDIFCNVNK 103
R Y+P++ D + D++T WP D D+F K
Sbjct: 314 RPYLPYVTYDEHRDSVTDACWPSTDFDVFMTCGK 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,299,761
Number of Sequences: 27780
Number of extensions: 356193
Number of successful extensions: 1253
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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