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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120161.Seq
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    90   2e-18
U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.     57   1e-08
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...    57   1e-08
Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...    56   3e-08
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...    48   9e-06
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    42   3e-04
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    41   8e-04
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    32   0.48 
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    32   0.48 
AC006720-4|AAF60448.1|  330|Caenorhabditis elegans Hypothetical ...    30   1.9  
U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,...    29   3.4  
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,...    29   3.4  
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,...    29   3.4  
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,...    29   3.4  
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,...    29   3.4  
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip...    29   3.4  
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip...    29   3.4  
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip...    29   3.4  
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip...    29   3.4  
L00665-1|AAA28148.1|  537|Caenorhabditis elegans protein ( Caeno...    29   4.5  
Z66567-4|CAA91493.2|  618|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z47073-4|CAM33507.1|  954|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMIDWRLE 439
           LG+  VI+ W +GV TM KGEV   T   +Y YG +GSPPKIP  ATL FE+E+ +W  E
Sbjct: 64  LGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123

Query: 440 DLSPTKNKGILRHILEAGT 496
           D+SP ++  ILR I+  G+
Sbjct: 124 DISPDRDGTILRTIIVEGS 142



 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 34/57 (59%), Positives = 39/57 (68%)
 Frame = +3

Query: 87  VDITKNGDRGVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           +DIT   D GVLK I +EG+G   P  G  V VHYVGTL +GTKFDSSRDR + F F
Sbjct: 6   IDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSF 62



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +1

Query: 511 NDGALVTVELEGRLQGDSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDEKSRLIIQ 690
           ND + V     G  QG    F  R V F +GEG+E  + EG+ERAL +F   EKS++ I+
Sbjct: 148 NDTSKVLAHCVGTYQGTE--FYNREVNFHIGEGSEEGLPEGVERALRRFQLGEKSKIEIR 205

Query: 691 -PKYAF 705
             KY +
Sbjct: 206 GHKYTY 211



 Score = 32.3 bits (70), Expect = 0.36
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +3

Query: 90  DITKNGDRGVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKF 221
           DI+ + D  +L+ I  EG  N  PN    V  H VGT   GT+F
Sbjct: 124 DISPDRDGTILRTIIVEGSKNSFPNDTSKVLAHCVGT-YQGTEF 166


>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 26/55 (47%), Positives = 34/55 (61%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMI 424
           +GK  VI+ W  GV  M  GE   LT + +  YG  G PP+IP NATL FE+E++
Sbjct: 51  IGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105



 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 24/48 (50%), Positives = 30/48 (62%)
 Frame = +3

Query: 114 GVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           GV ++I  EG+    P  G  V+ HYV TL +G K DSSRDR  PF+F
Sbjct: 2   GVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKF 49


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 26/55 (47%), Positives = 34/55 (61%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMI 424
           +GK  VI+ W  GV  M  GE   LT + +  YG  G PP+IP NATL FE+E++
Sbjct: 51  IGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105



 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 24/48 (50%), Positives = 30/48 (62%)
 Frame = +3

Query: 114 GVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           GV ++I  EG+    P  G  V+ HYV TL +G K DSSRDR  PF+F
Sbjct: 2   GVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKF 49


>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/55 (45%), Positives = 35/55 (63%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMI 424
           LG+  VI+ W  G+  M  GE  ILT  P   YG  G+PPKIP N+ L+F++E++
Sbjct: 76  LGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELM 130



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +3

Query: 165 QGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           +G  + +HY GTLLDGT+FDSSR RNE F F
Sbjct: 44  KGDQLHMHYTGTLLDGTEFDSSRTRNEEFTF 74


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = +3

Query: 114 GVLKRITREGEGNETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           GV ++I  +G+       G  V+ HYV  L+DGTK DSSRDR  PF+F
Sbjct: 198 GVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKF 245



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 24/78 (30%), Positives = 38/78 (48%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEMIDWRLE 439
           +G   VI    IG+P MK GE+     + +Y YG +G    IP NA+L  ++ + +   +
Sbjct: 133 IGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRLFNCSWD 192

Query: 440 DLSPTKNKGILRHILEAG 493
             +     G+ R IL  G
Sbjct: 193 SYAKI---GVDRQILVQG 207



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIP 388
           +GK  VI+ W  GV  M   E   LT AP + +     P  IP
Sbjct: 247 IGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEM 421
           +G   VI+   I +  M +GE   +   PE AYG +G PP IP N+ L F++ +
Sbjct: 197 MGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 108 DRGVLKRITREGEG-NETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           D GV   IT E EG  E    G  +   Y   L DG+  DSS  RN PF F
Sbjct: 145 DEGVHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIF 195


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +2

Query: 275 VIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEI 415
           VI+   I +  M +GE   +    EY YG+ GSPP+IP  A L FEI
Sbjct: 202 VIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEI 248


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEM 421
           L  + VI+   I +  M +GE   +    ++ YG  G  P IP  A L F+I +
Sbjct: 202 LNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 255



 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 108 DRGVLKRITREGEGNETPNQGCHVSVH--YVGTLLDGTKFDSSRDRNEPFEF 257
           D G++   T + + ++        ++H  YV  L DGT  DSS  RN PF F
Sbjct: 149 DEGIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIF 200


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 260 LGKDGVIEAWKIGVPTMKKGEVCILTCAPEYAYGASGSPPKIPPNATLQFEIEM 421
           L  + VI+   I +  M +GE   +    ++ YG  G  P IP  A L F+I +
Sbjct: 238 LNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 291



 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 108 DRGVLKRITREGEGNETPNQGCHVSVH--YVGTLLDGTKFDSSRDRNEPFEF 257
           D G++   T + + ++        ++H  YV  L DGT  DSS  RN PF F
Sbjct: 185 DEGIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIF 236


>AC006720-4|AAF60448.1|  330|Caenorhabditis elegans Hypothetical
           protein Y17G9B.7 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 407 FEIEMIDWRLEDLSPTKNKGILRHILEAGTGLDSPTMVHW-SQLN*KGDCKVIAKYSIR 580
           F+++   W +ED+     KGI  H+  A    D   +VH   +L+  GD +VI  Y +R
Sbjct: 251 FDLDAFRWDVEDVLEPLFKGIAYHVAPA----DREFIVHLPKKLSGCGDYRVIGGYDVR 305


>U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical
           protein C18H9.5 protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 150 NETPNQGCHVSVHYVGTLLDGTKFDSSRDRNEPFEF 257
           N+TPN   +VS   + T+ DG  F+SS+ R +  +F
Sbjct: 223 NDTPNDHKNVSSTELRTIRDGKIFESSKHRPQNVKF 258


>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2857

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2745 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2781


>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2836

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2724 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2760


>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2892

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2780 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2816


>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2734 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2770


>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2734 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2770


>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform e protein.
          Length = 2857

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2745 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2781


>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform f protein.
          Length = 2846

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2734 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2770


>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform d protein.
          Length = 2836

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2724 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2760


>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform a protein.
          Length = 2892

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559  DSKIFDQRTVTFSLGEGTEHNICEGIERALEKFLKDE 669
            D   FD R+VTF     TEHNI   +   +   +KDE
Sbjct: 2780 DRSRFDNRSVTFETHRETEHNIWHYLYYIVMLQIKDE 2816


>L00665-1|AAA28148.1|  537|Caenorhabditis elegans protein (
           Caenorhabditis eleganstransposable element Tc4, complete
           cds. ).
          Length = 537

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = +2

Query: 434 LEDLSPTKNKGILRHILEAGTGLDSPTMVHWSQLN*KGDCKVIAKYSIREQLHFHSAKVP 613
           +++L P  +  ++R+I E  TG+  P  V+W+    K   K    Y++R Q  +  A+  
Sbjct: 385 IKNLVPNGHDVVIRNIPEHTTGMIQPLDVYWN-APWKSLIKKFTAYALRTQTDYVIAQRN 443

Query: 614 NTI 622
           N I
Sbjct: 444 NAI 446


>Z66567-4|CAA91493.2|  618|Caenorhabditis elegans Hypothetical
           protein ZK455.4 protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 422 IDWRLEDLSPTKNKGILRHILEAGTGLDSPTMVHWS 529
           ++W +E+L  ++NKG L HI+      D+  +  WS
Sbjct: 405 LEWLIEELQDSENKGELVHIISHIPPGDNYCLKGWS 440


>Z47073-4|CAM33507.1|  954|Caenorhabditis elegans Hypothetical
           protein ZC506.4b protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 592 FSLGEGTEHNICEGIERALEKFLKDEKSRLIIQPKYAFKSEGIQN 726
           F    G+  + CE I+++ E F  D+K + +I   YA  + G+Q+
Sbjct: 384 FDTPPGSTASRCEDIKQSTEGFNADDKVQFVIDAVYAI-AHGLQS 427


>Z47073-3|CAA87374.1|  999|Caenorhabditis elegans Hypothetical
           protein ZC506.4a protein.
          Length = 999

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 592 FSLGEGTEHNICEGIERALEKFLKDEKSRLIIQPKYAFKSEGIQN 726
           F    G+  + CE I+++ E F  D+K + +I   YA  + G+Q+
Sbjct: 429 FDTPPGSTASRCEDIKQSTEGFNADDKVQFVIDAVYAI-AHGLQS 472


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,101,940
Number of Sequences: 27780
Number of extensions: 429979
Number of successful extensions: 1011
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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