Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120159.Seq
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -3

Query: 572 LQLQK--FFRDFTKRRQLWQLAQRLNL 498
           L+L+K   F  +  +++ W+LA+ LNL
Sbjct: 256 LELEKEFLFNAYVSKQKRWELARNLNL 282


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 560 KFFRDFTKRRQLWQLAQRLNLYNLDHIEMNVNFYEL 453
           +F  +  KRR+L +LAQ++N  N+  I    NF+++
Sbjct: 298 RFSDESKKRRELLRLAQQVNA-NIAQITA-ANFFDI 331


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +3

Query: 234 NYACRIKVEFYNKHDHKVDLFKRAEHVKSFAHIVEV 341
           ++  +++ +F    + + +LFK A+HV   A+IV +
Sbjct: 310 SWCYKLQEQFVTNSEVRTELFKLAQHVS--ANIVHI 343


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +3

Query: 234 NYACRIKVEFYNKHDHKVDLFKRAEHVKSFAHIVEV 341
           ++  +++ +F    + + +LFK A+HV   A+IV +
Sbjct: 310 SWCYKLQEQFVTNSEVRTELFKLAQHVS--ANIVHI 343


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 419 NSDKTLSHQLVNYIFLASNYFQNCAKNFNYM 327
           N ++  SH L   I     YFQ C   F+Y+
Sbjct: 320 NEEERNSHCLGGTITRTMWYFQICGSAFSYL 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,061
Number of Sequences: 336
Number of extensions: 3265
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)