Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120159.Seq
(733 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78990.1 68414.m09210 transferase family protein low similari... 33 0.15
At3g59020.1 68416.m06578 importin beta-2 subunit family protein ... 33 0.26
At5g57880.1 68418.m07240 expressed protein ; expression support... 31 1.0
At5g16410.1 68418.m01918 transferase family protein low similari... 30 1.4
At1g32910.1 68414.m04054 transferase family protein low similari... 30 1.8
At4g01760.1 68417.m00229 DC1 domain-containing protein similar t... 29 2.4
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 29 3.2
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 29 3.2
At2g31660.1 68415.m03865 importin beta-2 subunit family protein ... 29 4.2
At4g02190.1 68417.m00291 DC1 domain-containing protein contains ... 28 5.6
At3g11330.1 68416.m01378 leucine-rich repeat family protein 28 5.6
At5g16180.1 68418.m01891 hypothetical protein contains Pfam doma... 28 7.3
At2g25730.1 68415.m03084 expressed protein 28 7.3
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 27 9.7
At3g02310.1 68416.m00213 developmental protein SEPALLATA2 / flor... 27 9.7
At2g17520.1 68415.m02026 protein kinase family protein / Ire1 ho... 27 9.7
At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger) fa... 27 9.7
>At1g78990.1 68414.m09210 transferase family protein low similarity
to acetyl CoA: benzylalcohol acetyltransferase Clarkia
breweri GI:3170250, GI:6166336, Clarkia concinna
GI:6166326, anthranilate
N-hydroxycinnamoyl/benzoyltransferase Dianthus
caryophyllus GI:2239091; contains Pfam profile PF02458
transferase family
Length = 455
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -1
Query: 724 MSTTKKESKRRKLED-EDFL-KLKALEFSKDIVNEKLQKIIVVTDGMKRLYE 575
++++ K KR KLE FL KL A +KD V K K+ +V DG +RL E
Sbjct: 246 LASSSKNGKRTKLESFSAFLWKLVAEHAAKDPVPIKTSKLGIVVDGRRRLME 297
>At3g59020.1 68416.m06578 importin beta-2 subunit family protein
similar to D-Importin 7/RanBP7 [Drosophila melanogaster]
GI:7542336; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 1112
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 503 NLYNLDHIEMNVNFYELLFPLTLYNDND 420
++YNL +N +E++FPL +NDND
Sbjct: 372 SMYNLLQPHLNTLLFEIVFPLMCFNDND 399
>At5g57880.1 68418.m07240 expressed protein ; expression supported
by MPSS
Length = 385
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/91 (21%), Positives = 44/91 (48%)
Frame = -3
Query: 584 VVRILQLQKFFRDFTKRRQLWQLAQRLNLYNLDHIEMNVNFYELLFPLTLYNDNDNSDKT 405
V+ L ++ R T+ Q Q ++ +H+ ++++F L L+ + ND++
Sbjct: 128 VILSLARRRSRRKLTRSSQRLQPSEPDYEEEAEHLRISIDF---LLELSEADSNDSNFSN 184
Query: 404 LSHQLVNYIFLASNYFQNCAKNFNYMRETFN 312
SHQ V++IF + + +N + E+ +
Sbjct: 185 WSHQAVDFIFASLKKLISMGRNLESVEESIS 215
>At5g16410.1 68418.m01918 transferase family protein low similarity
to anthranilate N-hydroxycinnamoyl/benzoyltransferase
Dianthus caryophyllus GI:3288180, GI:2239091; contains
Pfam profile PF02458 transferase family
Length = 480
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 727 KMSTTKKESKRRKLED-EDFL-KLKALEFSKD-IVNEKLQKIIVVTDGMKRLYEYCNC 563
K T KR KLE FL KL A + + ++ K K+ +V DG K+L E NC
Sbjct: 266 KFQTLATNGKRTKLESFSAFLWKLLAKHAATESVLPTKTSKLGIVVDGRKKLMEQENC 323
>At1g32910.1 68414.m04054 transferase family protein low similarity
to anthranilate N-hydroxycinnamoyl/benzoyltransferase
Dianthus caryophyllus GI:2239091, benzylalcohol
acetyltransferase Clarkia breweri GI:6166336; contains
Pfam profile PF02458 transferase family
Length = 464
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 700 KRRKLED-EDFL-KLKALEFSKDIVNEKLQKIIVVTDGMKRLYE 575
+R KLE FL KL A +D+V+ K K+ +V DG +RL E
Sbjct: 257 QRTKLESFSAFLWKLVAKHTGRDLVSNKNSKMGIVVDGRRRLME 300
>At4g01760.1 68417.m00229 DC1 domain-containing protein similar to
T15B16.10 similar to A. thaliana CHP-rich proteins
encoded by T10M13, GenBank accession number AF001308
Length = 667
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 374 KICNLPIDEKAFCHCYHCHCTVSM 445
++C ID+K F HC C+ T+ M
Sbjct: 211 RLCGRKIDDKLFYHCSSCNFTLDM 234
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/73 (20%), Positives = 29/73 (39%)
Frame = +3
Query: 228 WQNYACRIKVEFYNKHDHKVDLFKRAEHVKSFAHIVEVFSAVLKIVTGQKYVIYQLMRKR 407
W +Y C + DH + K VKS V + L + Y++Y+ ++
Sbjct: 538 WGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQ 597
Query: 408 FVTVIIVIVQCQW 446
++ I + Q+
Sbjct: 598 YMDSEIRAIMAQY 610
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/73 (20%), Positives = 29/73 (39%)
Frame = +3
Query: 228 WQNYACRIKVEFYNKHDHKVDLFKRAEHVKSFAHIVEVFSAVLKIVTGQKYVIYQLMRKR 407
W +Y C + DH + K VKS V + L + Y++Y+ ++
Sbjct: 538 WGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLRQ 597
Query: 408 FVTVIIVIVQCQW 446
++ I + Q+
Sbjct: 598 YMDSEIRAIMAQY 610
>At2g31660.1 68415.m03865 importin beta-2 subunit family protein
similar to D-Importin 7/RanBP7 [Drosophila melanogaster]
GI:7542336; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 1040
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 503 NLYNLDHIEMNVNFYELLFPLTLYNDND 420
++Y L ++V +E++FPL +NDND
Sbjct: 338 SMYKLLLPRLDVLLFEIVFPLMCFNDND 365
>At4g02190.1 68417.m00291 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 659
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 374 KICNLPIDEKAFCHCYHCHCTVSMETATRKNLHSFQ 481
++C ID F HC C+ T+ M A SF+
Sbjct: 206 RLCEKKIDSPLFYHCSPCNFTLDMRCALNPPSISFE 241
>At3g11330.1 68416.m01378 leucine-rich repeat family protein
Length = 499
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -1
Query: 700 KRRKLEDEDFLKLKALEFSKDIVNEKLQKIIVVTDGMKRLYEYCNCKNSLETLPSAANYG 521
++ +L E F +++ L ++ N KL+ I G+ L E NSLETLP +
Sbjct: 208 RKLRLLPEAFGRIQGL-LVLNLSNNKLESIPDSIAGLHSLVELDVSTNSLETLPDSIGLL 266
Query: 520 SLLK 509
S LK
Sbjct: 267 SKLK 270
>At5g16180.1 68418.m01891 hypothetical protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 718
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 452 LFPLTLYNDNDNSDKTLSHQLVNYIFLASNYFQNCAKNFNYMRETFNVFGPFKQ 291
+F L L N +DN Q++N +FL++ F + N + R + F F++
Sbjct: 19 VFVLLLCNFSDNPKLQTFTQMLNSLFLSARAFPSLITNSSSRRAKSSQFDQFRE 72
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 350 CAKNFNYMRETFNVFGPFKQIDFMVMFVIKF-NFYATCVILPN 225
C Y R+ + K++ F ++F I F ++YA CV L N
Sbjct: 1394 CRSTATYFRQMIAIIAG-KRLSFFLLFEIMFGSWYARCVTLKN 1435
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 503 NLYNLDHIEMNVNFYELLFPLTLYNDNDNSDKTLSHQLVN 384
+L NL+ ++++ N++ FP LYN LS L+N
Sbjct: 85 DLSNLNFLDLSFNYFAGEFPTVLYNCTKLQYLDLSQNLLN 124
>At3g02310.1 68416.m00213 developmental protein SEPALLATA2 / floral
homeotic protein (AGL4) (SEP2) identical to
developmental protein SEPALLATA2 / floral homeotic
protein AGL4 GB:P29384 [Arabidopsis thaliana], Pfam HMM
hit: SRF-type transcription factors (DNA-binding and
dimerization domain)
Length = 250
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 610 IVVTDGMKRLYEYCNCKNSLETLP--SAANYGSL 515
++V +LYE+C+ N L+TL +YGS+
Sbjct: 45 LIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSI 78
>At2g17520.1 68415.m02026 protein kinase family protein / Ire1
homolog-2 (IRE1-2) contains protein kinase domain,
Pfam:PF00069; identical to Ire1 homolog-2 [Arabidopsis
thaliana] GI:15277139, cDNA Ire1 homolog-2 GI:15277138
Length = 841
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = -1
Query: 730 LKMSTTKKESKRRKLEDE--DFLKLKALEFSKDIV-----NEKLQKIIVVTDGMKRLYEY 572
+++S + S R +LE+ D LKA+E + + +EKL+ + + G R Y+Y
Sbjct: 709 MRLSFLRDASDRVELENREADSEILKAMESTAPVAIGGKWDEKLEPVFITNIGRYRRYKY 768
Query: 571 CNCKNSLETLPSAANY 524
+ ++ L + + N+
Sbjct: 769 DSIRDLLRVIRNKLNH 784
>At1g74760.1 68414.m08662 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 365 YWPKICNLPIDEKAFCHCYHCH-CTV 439
Y+ KIC L DE+ HC +C+ C V
Sbjct: 88 YFCKICKLYDDERKIYHCPYCNLCRV 113
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,004,287
Number of Sequences: 28952
Number of extensions: 249974
Number of successful extensions: 811
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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