Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120158X.Seq
(547 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0) 30 1.4
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 29 1.9
SB_10041| Best HMM Match : ig (HMM E-Value=3.5e-06) 29 3.3
SB_1718| Best HMM Match : I-set (HMM E-Value=3.8e-07) 29 3.3
SB_41618| Best HMM Match : OEP (HMM E-Value=0.56) 28 4.3
SB_12743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 28 5.7
SB_45886| Best HMM Match : OEP (HMM E-Value=2) 27 7.6
SB_23062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_39358| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1236
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = -2
Query: 540 PRRQLPSVCFVLNISNSGWVISRVLSIAMYLLSANLIFRVS*LSKLLRFFKSNSANS*VF 361
P Q P+ C +L+ V+ +S + LL +FR+ +LLRFF+ +
Sbjct: 792 PLDQFPNKCIILDD-----VMKIKMSFSPGLLRVVRVFRIG---RLLRFFEGAKGVRRLL 843
Query: 360 WILSSLFTIAVTVRTLLHLTRFIFIHLS-TTFAFEAFHKGIS 238
+ L V + TLL L FI+ + ++FA+ GI+
Sbjct: 844 FALVKSLPGLVNIATLLFLIIFIYAIIGMSSFAYVKKTNGIT 885
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +2
Query: 245 PL*NASKANVVDKCIKMKRVKCNKVRTVTAIVNSDDKIQKT-YELAEFDLKNLSSLESYE 421
PL +K + + K+ K T + N+ K+ K Y+LA+ K ++
Sbjct: 376 PLIANTKYKLANAKYKLANTKYKLANTKYKLANTKYKLAKAKYKLAKAKYKLANAKYKLA 435
Query: 422 TLKIKLALSKYMAMLSTLEMTQPLLEIFRTKQTLGNCR 535
K KLA +KY + ++ ++ + K L N +
Sbjct: 436 NTKYKLAKAKYKLANAKYKLANAKYKLAKAKYKLANAK 473
>SB_10041| Best HMM Match : ig (HMM E-Value=3.5e-06)
Length = 333
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 193 PSATGFMNPLNATMRANPFM---KRLKGKCCR*VYKNETCQMQQSSHGH 330
P + F NPLN +R P KR+ G +N+TCQ+ S H H
Sbjct: 128 PYSPIFYNPLNIPVRKTPLSVTDKRITGTW----RENQTCQLAHSLHLH 172
>SB_1718| Best HMM Match : I-set (HMM E-Value=3.8e-07)
Length = 1017
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 193 PSATGFMNPLNATMRANPFM---KRLKGKCCR*VYKNETCQMQQSSHGH 330
P + F NPLN +R P KR+ G +N+TCQ+ S H H
Sbjct: 296 PYSPIFYNPLNIPVRKTPLSVTDKRITGTW----RENQTCQLAHSLHLH 340
>SB_41618| Best HMM Match : OEP (HMM E-Value=0.56)
Length = 355
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 290 KMKRVKCNKVRTVTAIVNSDDKIQKT-YELAEFDLKNLSSLESYETLKIKLALSKYMAML 466
K+ K T + N+ K+ K Y+LA K ++ K KLA +KY
Sbjct: 6 KLANAKYKLANTKYKLANTKYKLAKAKYKLANAKYKLANTKYKLANTKYKLAKAKYKLAN 65
Query: 467 STLEMTQPLLEIFRTKQTLGNCR 535
+ ++ ++ TK L N +
Sbjct: 66 AKYKLANTKYKLANTKYKLANTK 88
>SB_12743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 520 CLLCSKYFQQRLGHFQGAEHSHVFAERQF 434
CL+C KYFQ R H HS F +
Sbjct: 75 CLICGKYFQGRGRHSYAYTHSVQFGHHVY 103
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/70 (21%), Positives = 38/70 (54%)
Frame = +2
Query: 296 KRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTL 475
+R+K +++ + V + +QKTY+ A++ +L +++ + I + + +S L
Sbjct: 777 QRIKAKRLKNYSLDVTTMGNVQKTYDTAQYPF-SLKTVKGKKVEIIAYGMDRITGPVSQL 835
Query: 476 EMTQPLLEIF 505
+M + + E+F
Sbjct: 836 DM-RTVAELF 844
>SB_45886| Best HMM Match : OEP (HMM E-Value=2)
Length = 238
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 335 IVNSDDKIQKT-YELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRT 511
+ N+ K+ K Y+LA K ++ E K KLA +KY + ++ + ++ +
Sbjct: 52 LANAKYKLAKAKYKLANAKYKLANAKYKLENAKYKLAKAKYKLANAKYKLAKAKYKLAKA 111
Query: 512 KQTLGNCRR 538
K L N +
Sbjct: 112 KYKLANANK 120
>SB_23062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 386 DLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFR 508
+ KN+SS Y T K K +L++ + + + + PL+E+FR
Sbjct: 275 ETKNMSSF--YWTKKYKKSLARSLREAAVIHLGVPLVELFR 313
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +2
Query: 296 KRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTL 475
K + C K ++ + S D I + + A +L SS E+ T + A S L
Sbjct: 202 KELNCLKQEVMSDLNISQDLIDQDFACANIELLRYSSTENIHTESSRGAFRG-----SQL 256
Query: 476 EMTQPLLEIFRTKQTLGN 529
P+L++ +T+ T+G+
Sbjct: 257 GRAFPMLKLSKTRVTVGD 274
>SB_39358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 353 KIQKTYELAEFDLKNLSSLESYETLKIKLALSKYM 457
K +K + L + +LK L E Y+ LK K L KY+
Sbjct: 90 KGKKPFYLRKSELKKLELAEKYKELKSKGKLQKYL 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,079,047
Number of Sequences: 59808
Number of extensions: 223523
Number of successful extensions: 662
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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