Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120158X.Seq
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.6  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.6  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    23   8.7  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 407  NCLDFLNQIRPIRRF 363
            NC++F  + +PIRR+
Sbjct: 1144 NCIEFALKAKPIRRY 1158


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 528 LPSVCFVLNISN 493
           L S+CFVL ISN
Sbjct: 42  LDSICFVLGISN 53


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 329 TAIVNSDDKIQKTYELAEFDL 391
           TA VNS   + KTYE    DL
Sbjct: 140 TAFVNSAYSLLKTYEFDGLDL 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,632
Number of Sequences: 2352
Number of extensions: 7335
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)