Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120158X.Seq
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069831-1|AAL39976.1|  485|Drosophila melanogaster SD07771p pro...    33   0.19 
AL138972-12|CAB72295.1|  721|Drosophila melanogaster EG:BACR7C10...    33   0.19 
AE014298-419|ABC67171.1|  485|Drosophila melanogaster CG9900-PC,...    33   0.19 
AE014298-418|AAF45794.1|  721|Drosophila melanogaster CG9900-PB,...    33   0.19 
X64390-1|CAB76122.1|  721|Drosophila melanogaster zw10 protein p...    33   0.25 

>AY069831-1|AAL39976.1|  485|Drosophila melanogaster SD07771p
           protein.
          Length = 485

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  + A +  DD +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AL138972-12|CAB72295.1|  721|Drosophila melanogaster
           EG:BACR7C10.3,FBgn0004643;mit(1)15 protein.
          Length = 721

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  + A +  DD +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AE014298-419|ABC67171.1|  485|Drosophila melanogaster CG9900-PC,
           isoform C protein.
          Length = 485

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  + A +  DD +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AE014298-418|AAF45794.1|  721|Drosophila melanogaster CG9900-PB,
           isoform B protein.
          Length = 721

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  + A +  DD +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>X64390-1|CAB76122.1|  721|Drosophila melanogaster zw10 protein
           protein.
          Length = 721

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTAIVNSDDKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  + A +  DD +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFARLVQL 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,275,223
Number of Sequences: 53049
Number of extensions: 338158
Number of successful extensions: 876
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)