Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120149.Seq
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro...    30   3.0  
AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p pro...    30   3.0  
AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-P...    30   3.0  
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P...    30   3.0  
AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-P...    29   4.0  
BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p pro...    28   9.3  

>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p
           protein.
          Length = 1240

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +3

Query: 288 SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVSSANADTWRPR*APST 467
           S SN  P      N C+   IR+R+  + R  V+ +S    FN S    +    +  PS 
Sbjct: 560 SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESVSQAKPSK 619

Query: 468 RLAK 479
            LA+
Sbjct: 620 PLAR 623


>AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p
           protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +3

Query: 288 SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVSSANADTWRPR*APST 467
           S SN  P      N C+   IR+R+  + R  V+ +S    FN S    +    +  PS 
Sbjct: 54  SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSK 113

Query: 468 RLAK 479
            LA+
Sbjct: 114 PLAR 117


>AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-PC,
           isoform C protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +3

Query: 288 SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVSSANADTWRPR*APST 467
           S SN  P      N C+   IR+R+  + R  V+ +S    FN S    +    +  PS 
Sbjct: 54  SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSK 113

Query: 468 RLAK 479
            LA+
Sbjct: 114 PLAR 117


>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
            isoform D protein.
          Length = 1593

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +3

Query: 288  SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVSSANADTWRPR*APST 467
            S SN  P      N C+   IR+R+  + R  V+ +S    FN S    +    +  PS 
Sbjct: 916  SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESISQAKPSK 975

Query: 468  RLAK 479
             LA+
Sbjct: 976  PLAR 979


>AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-PA
           protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 267 KMFFNCVCCLCCWL 226
           ++ F C CC CCWL
Sbjct: 124 RLAFVCCCCCCCWL 137


>BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p
           protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 404 NKIQCFECKCRYLASSLSTLDEACKMGWDIFLRPMLACLS 523
           N+ Q  +C CR  A  +S+ +   +  W I LRP  A ++
Sbjct: 1   NRYQDVQCVCRLSAIDISSANRYFQNNWLISLRPNAAVMT 40


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,241,977
Number of Sequences: 53049
Number of extensions: 691222
Number of successful extensions: 2249
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2248
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)