Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120148.Seq
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 137 SLMYSFNHVFF 169
           S MY+F H+FF
Sbjct: 66  SYMYAFTHIFF 76


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 500 YSFYDVFAVFSAFLAFC 550
           Y F+  F +F+  L FC
Sbjct: 167 YHFFCAFIIFTMHLLFC 183


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 114 LFLVYYLSHRC 82
           +F +YYLSH C
Sbjct: 262 IFELYYLSHVC 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,592
Number of Sequences: 336
Number of extensions: 2204
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)