Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120148.Seq
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC005757-1|AAC62258.1|  540|Homo sapiens R32611_1 protein.             31   3.5  

>AC005757-1|AAC62258.1|  540|Homo sapiens R32611_1 protein.
          Length = 540

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -2

Query: 511 VETIVMSHSDILN--LKELRNKLMSNKSIDTVGLQCLKVKC 395
           +ET+ + H+ I N  ++ L+N L+SN+S+  +GL   K+ C
Sbjct: 263 LETLNLGHNPIGNEGVRHLKNGLISNRSVLRLGLASTKLTC 303


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,610,392
Number of Sequences: 237096
Number of extensions: 1143690
Number of successful extensions: 5612
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5612
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)