Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120147.Seq
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.           24   5.7  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   5.7  

>AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 515 KYRGHIANCIGSSIFNRN 462
           K RG+I NC   ++FN N
Sbjct: 133 KGRGYILNCAPGTLFNPN 150


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 601 CDLRATCIIKFINTSVF 551
           C+ +A CI  F NT V+
Sbjct: 156 CNFKAYCIFSFFNTIVY 172


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,357
Number of Sequences: 2352
Number of extensions: 14119
Number of successful extensions: 71
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)