Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120143.Seq
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 95 6e-20
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 89 3e-18
02_01_0160 + 1116160-1116678 85 5e-17
09_06_0359 + 22508900-22509439 84 8e-17
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 73 2e-13
10_01_0309 + 3417602-3418147 71 8e-13
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 70 1e-12
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 69 3e-12
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 65 5e-11
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 56 3e-08
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 52 4e-07
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 50 2e-06
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 47 2e-05
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 46 4e-05
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 45 5e-05
06_01_0214 + 1634171-1634173,1634263-1634742 44 1e-04
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 38 0.005
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 38 0.007
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 37 0.017
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 31 0.62
01_01_0077 - 585670-585787,585921-586687 31 0.62
06_01_0675 + 4937309-4937354,4937606-4937718,4937810-4937905,493... 31 1.1
03_04_0032 - 16663018-16663026,16663072-16663235,16663384-166635... 31 1.1
01_06_0984 + 33585875-33585877,33586158-33586268,33587604-33588245 29 4.4
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
+ ENFRALCTGEK FGYKGSSFHR+I DFM QGGDF NGTGGKSIYGR
Sbjct: 113 QTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGR 163
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 423 QVYFDVTAD---GEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLGTRVHHF 569
+VYFD++ G+ +GR+VI L D+VP+TA +KG G + F
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSF 135
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +2
Query: 509 ENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+NFRALCTG+K +GYKG SFHRII DFM QGGDF N+NGTGG+SIYG
Sbjct: 96 DNFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYG 142
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 417 DKQVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+ + +FDV GEP GRIVI L + VPKT KG G
Sbjct: 65 NSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYG 109
>02_01_0160 + 1116160-1116678
Length = 172
Score = 85.0 bits (201), Expect = 5e-17
Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 7/54 (12%)
Frame = +2
Query: 509 ENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGEK G YKGS+FHR+IP+FMCQGGDFT NGTGG+SIYG
Sbjct: 34 ENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYG 87
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+V+FD+T G P GRIV++L +VP+TA +KG+G
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVG 47
>09_06_0359 + 22508900-22509439
Length = 179
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 7/57 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFR LCTGEK G YKGS+FHRIIP+FMCQGGDFT NGTGG+SIYG
Sbjct: 33 KTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYG 89
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 402 ASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
AS P +V+FD+ GR+V++L D VPKTA +KGLG
Sbjct: 2 ASKNP--KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLG 49
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 7/57 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFRALCTGEK G +KGS+FHRIIP FM QGGDFT +G GG+SIYG
Sbjct: 78 KTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYG 134
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +3
Query: 309 SVMKIPIMIPVSM-LRRTLVNGTIYSAAALRFAS--TQPDKQVYFDVTADGEPLGRIVIK 479
+V + P+ P S+ L LV T+ A A + + T+ +VYFDV DG+P GR+V+
Sbjct: 11 AVRRPPMSRPASVCLWIVLVAATLALAQAKKSKADLTEVTHKVYFDVEIDGKPAGRVVMG 70
Query: 480 LNTDEVPKTARTLELCVLVKKGLG 551
L VPKTA +KG G
Sbjct: 71 LFGKTVPKTAENFRALCTGEKGTG 94
>10_01_0309 + 3417602-3418147
Length = 181
Score = 70.9 bits (166), Expect = 8e-13
Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 7/54 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEK-------RFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 640
+ ENFR LCTGE+ R YKGS+FHR++P FMCQGGD T NGTGG+S
Sbjct: 38 DTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGES 91
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +3
Query: 402 ASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTARTL-ELCVLVKKGLG--TRVHH 566
AS++ + +V+ D+ GE +GR+VI+L D+VP TA LC + G +R+H+
Sbjct: 5 ASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHY 62
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 8/55 (14%)
Frame = +2
Query: 509 ENFRALCTGEKRFG--------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGE G YKGS FHR+I FM QGGDF+N +G+GG+SIYG
Sbjct: 37 ENFRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYG 91
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 426 VYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
V+ DV+ EP R+V +L D P+TA + G+G
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIG 50
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/57 (59%), Positives = 38/57 (66%), Gaps = 7/57 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFRA+CTGEK G YKG+ FHRIIP FM QGGD + NGTG SIYG
Sbjct: 67 KTAENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYG 123
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 360 LVNGTIYSAAALRFAS--TQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVL 533
LV T+ A A+ + T+ +V+FD+T +G+P GRIV+ L + VPKTA
Sbjct: 18 LVAATLSLAQAVESEAELTKVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICT 77
Query: 534 VKKGLG 551
+KGLG
Sbjct: 78 GEKGLG 83
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Frame = +2
Query: 500 ENCENFRALCTGEKRF-----GYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFR CTGE R GYKG FHR+I DFM QGGD+ +GTG SIYG
Sbjct: 64 KTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYG 118
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 426 VYFDVTADGEPLGRIVIKLNTDEVPKTA 509
V+FDVT P GRI ++L D VPKTA
Sbjct: 39 VFFDVTIGSIPAGRIKMELFADIVPKTA 66
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/47 (59%), Positives = 30/47 (63%), Gaps = 7/47 (14%)
Frame = +2
Query: 512 NFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTG 631
NFRALCTGE+ G YKGS FHRIIP FM QGGD +G G
Sbjct: 69 NFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKG 115
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VY DV DG+ +GRIVI L D VPKT ++G+G
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIG 81
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +2
Query: 539 KRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
K F +GS FHR+I FM QGGD T +GTGG+SIYG
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYG 149
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 366 NGTIYSAAALRFASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKG 545
+ + SAAA P + + DV+ GE GRIVI+L VP+TA +KG
Sbjct: 10 SAAVASAAAAEVEVKNP--RCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKG 67
Query: 546 LG 551
+G
Sbjct: 68 VG 69
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/69 (46%), Positives = 35/69 (50%), Gaps = 22/69 (31%)
Frame = +2
Query: 509 ENFRALCTGEKRFGY----------------------KGSSFHRIIPDFMCQGGDFTNHN 622
ENFRALCTGEK KGS HRI+ FM QGGD T +
Sbjct: 63 ENFRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTKGSCIHRIVKGFMVQGGDITAGD 122
Query: 623 GTGGKSIYG 649
GTGG+SIYG
Sbjct: 123 GTGGESIYG 131
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 429 YFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGL 548
Y DV+ G+ GRIV++L P+TA +KG+
Sbjct: 36 YLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGV 75
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 455 AIGTYSHKIEHG*STENCENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGG 634
++G ++ ++ + + + C NF L +R Y FHRII DF+ QGGD T G GG
Sbjct: 17 SMGAFTIEMYYKHAPKTCRNFLEL---SRRGYYDNVIFHRIIKDFIVQGGDPTG-TGRGG 72
Query: 635 KSIYG 649
+SIYG
Sbjct: 73 ESIYG 77
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +2
Query: 506 CENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
CENF C E + Y G FHR I +FM QGGD T G+GG+SI+G+
Sbjct: 369 CENFLTHC--ENGY-YNGLIFHRSIKNFMIQGGDPTG-TGSGGESIWGK 413
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 551 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
Y G+ FHR+I F+ QGGD T +GTGG+SIYG
Sbjct: 49 YDGTLFHRVIKSFLVQGGDPTG-SGTGGESIYG 80
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +2
Query: 509 ENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
ENF ALC Y G+ FHR I FM QGGD T G GG SI+G+
Sbjct: 26 ENFLALCASGY---YDGTIFHRNIKGFMIQGGDPTG-TGKGGTSIWGK 69
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 8/38 (21%)
Frame = +2
Query: 509 ENFRALCTGEKRFG--------YKGSSFHRIIPDFMCQ 598
ENFRALCTGE+ G +KG++ HRI+ FM Q
Sbjct: 38 ENFRALCTGERGLGVSTQKPLYFKGTNMHRILKGFMAQ 75
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 426 VYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
V+FD+ G RI +L D VPKT ++GLG
Sbjct: 10 VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLG 51
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 509 ENFRALCTGEKRFGYKGSS-FHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
ENF C R GY + FHR+I FM Q GD +GTGG+SI+GR
Sbjct: 521 ENFTTHC----RNGYYDNLIFHRVIKGFMIQTGDPLG-DGTGGQSIWGR 564
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 509 ENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIY 646
+NF LC K Y G FH++ DF+ Q GD T G GG S+Y
Sbjct: 26 KNFLKLC---KMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGDSVY 67
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 455 AIGTYSHKIEHG*STENCENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNG 625
A G+ + +I S + + F +LC K +KG F +I +F+ QGGDF + NG
Sbjct: 101 AKGSITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIKNFVIQGGDF-DFNG 153
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 381 SAAALRFASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTA-RTLELCVLVKKGLGTR 557
+AAA A + + DV+ GEP GRI I L D P A R L L G+G R
Sbjct: 62 AAAAPCIADLPVTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT----GVGYR 117
Query: 558 VHHFIE 575
F++
Sbjct: 118 RKEFVK 123
>06_01_0675 +
4937309-4937354,4937606-4937718,4937810-4937905,
4938003-4938059,4938145-4938300,4938402-4938486,
4938727-4938817,4938896-4939060,4939150-4939345,
4939593-4939731,4940187-4941874,4942575-4942765,
4942850-4942994
Length = 1055
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 438 HRNKLVYQVESKQNEVLQQSILSH 367
H+++L+ Q+ K E+LQQ IL H
Sbjct: 673 HQSQLIQQLSQKSQEILQQQILQH 696
>03_04_0032 -
16663018-16663026,16663072-16663235,16663384-16663517,
16664300-16664393,16667458-16667566,16668441-16668489,
16668622-16668647
Length = 194
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -2
Query: 512 SRSFRYFIRVQFYDYTSQWLSVSSYIEINLFIRLSRSKTKCCSRVYCPID*SSPKH*YRY 333
S + R +R+ + ++WL+V++ N L + + C+ CPI + PK+ YR+
Sbjct: 39 SGNLREAVRLPIGEDLNEWLAVNTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRW 98
Query: 332 HD 327
D
Sbjct: 99 AD 100
>01_06_0984 + 33585875-33585877,33586158-33586268,33587604-33588245
Length = 251
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 464 TYSHKIEHG*STE-NCENFRALCTGEKRFGYKG-SSFHRIIPDFMCQGGDF 610
TY+H I HG E + E + L + G G SSF+ ++ ++C+GGDF
Sbjct: 137 TYNHLI-HGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDF 186
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,438,536
Number of Sequences: 37544
Number of extensions: 350415
Number of successful extensions: 717
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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