Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120143.Seq
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118012-1|AAM66811.1|  120|Anopheles gambiae glucose-6-phosphat...    24   3.7  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   5.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.7  

>AY118012-1|AAM66811.1|  120|Anopheles gambiae glucose-6-phosphate
           dehydrogenase protein.
          Length = 120

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 556 LVPKPFFTSTQSSKVLAV 503
           +V KPF    QSSKVL+V
Sbjct: 103 IVEKPFGRDAQSSKVLSV 120


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 506 SFRYFIRVQFYDYTSQWLSVSSYIEINLF 420
           +FR+   VQF   T  W S+  YI +  F
Sbjct: 281 TFRWVFFVQFIQCTMIWCSLILYIAVTGF 309


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 468 YVPMALRQQLHRNKLVYQVESKQNEVLQQ 382
           YVP  LRQQ  + +   Q + +Q +  QQ
Sbjct: 264 YVPPQLRQQRQQQQRPRQQQQQQQQQQQQ 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,272
Number of Sequences: 2352
Number of extensions: 14150
Number of successful extensions: 46
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)