Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120143.Seq
(666 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 92 3e-19
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 92 3e-19
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 85 3e-17
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 85 5e-17
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 82 4e-16
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 81 7e-16
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 81 9e-16
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 80 1e-15
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 79 3e-15
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 75 6e-14
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 75 6e-14
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 75 6e-14
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 67 1e-11
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 63 2e-10
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 61 7e-10
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 56 2e-08
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 49 2e-06
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 47 1e-05
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 45 4e-05
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 44 9e-05
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 44 1e-04
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 43 2e-04
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 38 0.006
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 38 0.008
At1g14390.1 68414.m01706 leucine-rich repeat transmembrane prote... 31 0.91
At5g45550.1 68418.m05594 mob1/phocein family protein contains Pf... 29 2.1
At5g20180.2 68418.m02404 ribosomal protein L36 family protein co... 29 3.7
At5g20180.1 68418.m02403 ribosomal protein L36 family protein co... 29 3.7
At3g61270.1 68416.m06857 expressed protein 28 4.9
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/51 (76%), Positives = 43/51 (84%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
+ ENFRALCTGEK FGYKGS+FHR+I DFM QGGDF NGTGGKS+YGR
Sbjct: 120 QTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGR 170
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 423 QVYFDVTAD---GEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VYFD++ G+ GRIVI L D+VP+T +KG G
Sbjct: 91 KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG 136
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +2
Query: 509 ENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGEK++GYKGSSFHRII DFM QGGDFT NGTGG SIYG
Sbjct: 125 ENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYG 171
Score = 35.5 bits (78), Expect = 0.032
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLE-LCVLVKK-GL-GTRVHHFIE 575
+VYFDV GE GRIV+ L + VPKT LC KK G G+ H I+
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIK 149
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/57 (70%), Positives = 43/57 (75%), Gaps = 7/57 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
E ENFRALCTGE+ G YKGSSFHR+IP FMCQGGDFT NGTGG+SIYG
Sbjct: 32 ETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYG 88
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VYFD+T G+ GRIV++L D P+TA ++G+G
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIG 48
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/57 (68%), Positives = 44/57 (77%), Gaps = 7/57 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFRALCTGEK G +KGSSFHR+IP+FMCQGGDFT NGTGG+SIYG
Sbjct: 32 KTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYG 88
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+V+FD+T G P G+IV++L TD+ PKTA +KG+G
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVG 48
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/54 (70%), Positives = 42/54 (77%), Gaps = 7/54 (12%)
Frame = +2
Query: 509 ENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGEK G +KGS FHR+IP+FMCQGGDFT NGTGG+SIYG
Sbjct: 34 ENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYG 87
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VYFD+T DG+P GRIV++L TD+ P+TA +KG+G
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVG 47
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 81.0 bits (191), Expect = 7e-16
Identities = 38/54 (70%), Positives = 41/54 (75%), Gaps = 7/54 (12%)
Frame = +2
Query: 509 ENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGEK G +KGS FHR+IP FMCQGGDFT NGTGG+SIYG
Sbjct: 34 ENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYG 87
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+V+FD++ G P+GRI ++L D P TA +KG+G
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMG 47
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 80.6 bits (190), Expect = 9e-16
Identities = 38/53 (71%), Positives = 40/53 (75%), Gaps = 7/53 (13%)
Frame = +2
Query: 512 NFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
NFRALCTGE G YKGS+FHRIIP FMCQGGDFT NGTGG+SIYG
Sbjct: 35 NFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYG 87
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+V+FD+ GR+V++L D P+TA + G+G
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIG 47
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/54 (72%), Positives = 41/54 (75%), Gaps = 7/54 (12%)
Frame = +2
Query: 509 ENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGEK G YKGSSFHRIIP FM QGGDFT+ NG GG+SIYG
Sbjct: 65 ENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYG 118
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VYFDV DG+ GRIV+ L VPKT +KG+G
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIG 78
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/58 (65%), Positives = 42/58 (72%), Gaps = 7/58 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
+ ENFRALCTGEK G YKGS FHRIIP FM QGGDFT+ NG GG+SIYG+
Sbjct: 59 KTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQ 116
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VYFDV DG+ GR+VI L VPKTA +KG+G
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 8/58 (13%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG--------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFRALCTGE G +KGSSFHR+I FM QGGDF+N NGTGG+SIYG
Sbjct: 34 KTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYG 91
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 426 VYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
V+ DV+ G+P+ RIVI+L D VPKTA + G+G
Sbjct: 9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVG 50
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 8/58 (13%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG--------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFRALCTGE G +KGSSFHR+I FM QGGDF+N NGTGG+SIYG
Sbjct: 34 KTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYG 91
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 426 VYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
V+ DV+ G+P+ RIVI+L D VPKTA + G+G
Sbjct: 9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVG 50
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 7/57 (12%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFR+LCTGEK G +KGSSFHRIIP FM QGGDFT +G GG+SIYG
Sbjct: 86 KTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYG 142
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+VYFD+ +G P GRI+I L + VPKTA +KG+G
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVG 102
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 8/58 (13%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFG--------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFR LCTGEK G YKG+ FHR+I FM QGGD + ++GTGG+SIYG
Sbjct: 31 KTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYG 88
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 429 YFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+ D++ GE GRIVI+L D VPKTA L +KGLG
Sbjct: 7 FMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLG 47
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/54 (59%), Positives = 34/54 (62%), Gaps = 8/54 (14%)
Frame = +2
Query: 509 ENFRALCTGEKRFG--------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIY 646
ENFRALCTGEK G YKGS FHRI+ Q GDF N NGT G+SIY
Sbjct: 37 ENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIY 90
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLGTR 557
QV+ DV+ DG+P +V +L + PKT+ +KG+G R
Sbjct: 8 QVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPR 52
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +2
Query: 500 ENCENFRALCTGEKR-----FGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
+ ENFR CTGE R GYK FHR+I DFM Q GDF ++G+G SIYG
Sbjct: 59 KTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDGSGCMSIYG 113
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 426 VYFDVTADGEPLGRIVIKLNTDEVPKTA 509
V+FDV+ G P GRI ++L D PKTA
Sbjct: 34 VFFDVSIGGIPAGRIKMELFADIAPKTA 61
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Frame = +2
Query: 509 ENFRALCTGEKR-------FGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
ENFRALCTGEK YKG+ FHRII F+ QGGD + +G SIYG
Sbjct: 77 ENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYG 130
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKG 545
+V+ DV DG+ LGRIVI L VPKT +KG
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKG 88
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 506 CENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
CENF LC +R Y G +FHR I +FM QGGD T G GG+SI+G+
Sbjct: 368 CENFITLC---ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGK 412
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 455 AIGTYSHKIEHG*STENCENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGG 634
++G ++ ++ + S C NF L +R Y FHRI+ DF+ QGGD T G GG
Sbjct: 17 SMGPFTVEMYYKHSPRTCRNFLEL---SRRGYYDNVLFHRIVKDFIVQGGDPTG-TGRGG 72
Query: 635 KSIYG 649
+SIYG
Sbjct: 73 ESIYG 77
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +2
Query: 509 ENFRALCTGEKRFG-------YKGSSFHRIIPDFMCQGGDFTNHN 622
ENFR LCTGE+ G YKGS+F I+PD M GGD N
Sbjct: 34 ENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLMWCGGDIIFEN 78
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 423 QVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLG 551
+V+FD+T DG+P GRIVI+L D P+TA ++G+G
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIG 47
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 414 PDKQVYFDVTADGEPLGRIVIKLNTDEVPKTARTLELCVLVKKGLGTRVHHFIE 575
P K+ + DV+ DGEP+GRI+I L D+VP V K G+ R F++
Sbjct: 90 PTKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVK 143
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFGYKGSS-FHRIIPDFMCQGGDFTNHNGTGGKSIYG 649
++ NF LC GY ++ FHR+IP F+ QGGD T +GTGG SIYG
Sbjct: 35 KSVRNFVQLCLE----GYFDNTIFHRVIPGFLVQGGDPTG-SGTGGDSIYG 80
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +2
Query: 500 ENCENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
++ ENF ALC Y G+ FHR I FM QGGD G GG SI+G+
Sbjct: 23 KSAENFLALCASGY---YDGTIFHRNIKGFMIQGGD-PKGTGKGGTSIWGK 69
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 509 ENFRALCTGEKRFGYKGSS-FHRIIPDFMCQGGDFTNHNGTGGKSIYGR 652
ENF C R GY + FHR+I FM Q GD +GTGG+SI+GR
Sbjct: 501 ENFTTHC----RNGYYDNHLFHRVIRGFMIQTGDPLG-DGTGGQSIWGR 544
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +2
Query: 506 CENFRALCTGEKRFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIY 646
C+NF LC K Y G FH + DF Q GD T G GG SIY
Sbjct: 25 CKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIY 67
>At1g14390.1 68414.m01706 leucine-rich repeat transmembrane protein
kinase, putative similar to putative receptor-like
protein kinase GI:2947063 from [Arabidopsis thaliana]
Length = 747
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -3
Query: 496 TSSVFNFMTIRPNGSPSAVTSK*TCLSG*VEAKRSAAAEYIVPLTKVRRSIDTGIMIGIF 317
T +F F + NGSPSA + EAK++ AA K R+ DTGI +G+
Sbjct: 299 TVLLFTFNCLSINGSPSAKYQRPVTFCE-NEAKQAVAAVKSDTKDKERKEEDTGIELGLV 357
Query: 316 I 314
I
Sbjct: 358 I 358
>At5g45550.1 68418.m05594 mob1/phocein family protein contains Pfam
profile: PF03637 Mob1/phocein family
Length = 215
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -2
Query: 512 SRSFRYFIRVQFYDYTSQWLSVSSYIEINLFIRLSRSKTKCCSRVYCPID*SSPKH*YRY 333
S + R +R+ + ++WL+V++ N L + T+ C+ CP + PK+ YR+
Sbjct: 38 SGNLREAVRLPPGEDANEWLAVNTVDFFNQVNLLYGTLTEFCTPDNCPTMTAGPKYEYRW 97
Query: 332 HD 327
D
Sbjct: 98 AD 99
>At5g20180.2 68418.m02404 ribosomal protein L36 family protein
contains Pfam profile: PF00444 ribosomal protein L36
Length = 103
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 281 VKYTGRIYLVCDENPNH 331
VK GR+Y++C NP H
Sbjct: 17 VKRRGRVYVICSSNPKH 33
>At5g20180.1 68418.m02403 ribosomal protein L36 family protein
contains Pfam profile: PF00444 ribosomal protein L36
Length = 103
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 281 VKYTGRIYLVCDENPNH 331
VK GR+Y++C NP H
Sbjct: 17 VKRRGRVYVICSSNPKH 33
>At3g61270.1 68416.m06857 expressed protein
Length = 498
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 489 PCSIL*LYVPMALRQQLHRN-KLVYQVESKQNEVLQ 385
PC +L Y P+AL++ L R L QVE +N+ Q
Sbjct: 457 PCEMLPPYDPLALKEVLERKANLTRQVELWENQYFQ 492
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,336,779
Number of Sequences: 28952
Number of extensions: 297320
Number of successful extensions: 675
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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