Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120140.Seq
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    31   0.010
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    31   0.010
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.12 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.1  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = -3

Query: 414 VTSLCMSNLYIIYFL*ITAFKIQFYKTKEILNLI*NLHLCDIIRLFTFIYTSINIF*VKK 235
           + S  M   Y+++    T FKI FY T   +NL+  + + D+I L   ++T +     K+
Sbjct: 26  IHSYFMVAFYVVFSSVSTFFKIPFYSTLRPINLLVQI-ILDVILLILNVHTILTTI-TKR 83

Query: 234 RRLCYL 217
            + C L
Sbjct: 84  NQWCKL 89


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = -3

Query: 414 VTSLCMSNLYIIYFL*ITAFKIQFYKTKEILNLI*NLHLCDIIRLFTFIYTSINIF*VKK 235
           + S  M   Y+++    T FKI FY T   +NL+  + + D+I L   ++T +     K+
Sbjct: 26  IHSYFMVAFYVVFSSVSTFFKIPFYSTLRPINLLVQI-ILDVILLILNVHTILTTI-TKR 83

Query: 234 RRLCYL 217
            + C L
Sbjct: 84  NQWCKL 89


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 363 TAFKIQFYKTKEILNLI*NLHLCDIIRLFTFIYTSINIF*VKKRRLCYL 217
           T FKI FY T   +NL+  + + D+I L   ++T +     K+ + C L
Sbjct: 363 TFFKIPFYSTLRPINLLVQI-ILDVILLILNVHTILTTI-TKRNQWCKL 409


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 604 NKFYY*YKYTVNLIGFELSRCVQFRT 681
           + FY  YKYT N++   L+  + + T
Sbjct: 37  HSFYKIYKYTYNIVAVSLTAYMVYIT 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 441  TRSGTWWSNVTS 406
            T+  TWWS+ T+
Sbjct: 1037 TKPSTWWSSTTT 1048


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 346 LNFKCRNLKKIY 381
           L FKC NL++IY
Sbjct: 46  LVFKCYNLRRIY 57


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 227 CATCGN*MHTSLF 189
           C  CGN + TSLF
Sbjct: 637 CEKCGNKIDTSLF 649


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,140
Number of Sequences: 336
Number of extensions: 3316
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)