BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120139.Seq (704 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P41672 Cluster: Uncharacterized 59.7 kDa protein in HE6... 128 1e-28 UniRef50_O10358 Cluster: Uncharacterized 59.0 kDa protein precur... 107 3e-22 UniRef50_Q8V5Q2 Cluster: ORF114; n=4; Nucleopolyhedrovirus|Rep: ... 97 5e-19 UniRef50_Q9YMH3 Cluster: LdOrf-155 peptide; n=1; Lymantria dispa... 71 3e-11 UniRef50_Q0N3Y2 Cluster: PIF-1; n=2; Nucleopolyhedrovirus|Rep: P... 69 1e-10 UniRef50_Q6QNZ9 Cluster: PIF; n=3; Nucleopolyhedrovirus|Rep: PIF... 62 1e-08 UniRef50_Q0IKX1 Cluster: ORF148; n=1; Leucania separata nuclear ... 48 3e-04 UniRef50_O10359 Cluster: Uncharacterized 9.3 kDa protein; n=12; ... 40 0.060 UniRef50_Q0LEB1 Cluster: Glycosyl transferase, group 1; n=1; Her... 34 3.0 UniRef50_A6PLD5 Cluster: Inosine/uridine-preferring nucleoside h... 33 5.2 UniRef50_Q17MG4 Cluster: Ikappab kinase complex-associated prote... 33 6.8 UniRef50_Q6CDQ9 Cluster: Similar to DEHA0C03773g Debaryomyces ha... 33 6.8 UniRef50_Q0FED9 Cluster: Transcriptional regulator, AraC family ... 33 9.0 >UniRef50_P41672 Cluster: Uncharacterized 59.7 kDa protein in HE65-PK2 intergenic region precursor; n=12; Nucleopolyhedrovirus|Rep: Uncharacterized 59.7 kDa protein in HE65-PK2 intergenic region precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV) Length = 530 Score = 128 bits (309), Expect = 1e-28 Identities = 62/88 (70%), Positives = 72/88 (81%), Gaps = 4/88 (4%) Frame = +3 Query: 3 KYFWGRRDHTEFSDADVVFQANANQLSHERYQAILYPLLGS----TEIVPAGTGVMKISV 170 K+FWGR DHTEF+DAD+VFQAN NQLSHERY+AILY LL S TEIV GVMKISV Sbjct: 332 KFFWGRSDHTEFADADMVFQANVNQLSHERYRAILYSLLESHPDVTEIVTVNMGVMKISV 391 Query: 171 SYDTTLKDMRLPFSIFRIFRLKESSTSR 254 SYDTTLK++ LP S+FR+FR KES T++ Sbjct: 392 SYDTTLKNILLPSSVFRLFRFKESGTAQ 419 Score = 128 bits (309), Expect = 1e-28 Identities = 55/83 (66%), Positives = 61/83 (73%) Frame = +2 Query: 260 CFFPGVGRCILADPDACIRRHGGFFVWTAETFTNSWCILSREDTHIKIWSSASRYPRGDA 439 CFFPGVGRCI + D+CIRRH G VWTAETFTNSWC+LSRE THIK+WS ASRYPRGDA Sbjct: 422 CFFPGVGRCITVNSDSCIRRHAGGQVWTAETFTNSWCVLSREGTHIKVWSRASRYPRGDA 481 Query: 440 PAVXXXXXXXXXXXXEQNTIRTI 508 PA E+NTIR + Sbjct: 482 PAALRLRGFFLNNDRERNTIRAV 504 Score = 50.8 bits (116), Expect = 3e-05 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = +1 Query: 508 STGAMTQGQQIDALTQILQTYPNYSL 585 +TG MTQGQQIDALTQIL+TYPNYS+ Sbjct: 505 TTGDMTQGQQIDALTQILETYPNYSV 530 >UniRef50_O10358 Cluster: Uncharacterized 59.0 kDa protein precursor; n=7; Nucleopolyhedrovirus|Rep: Uncharacterized 59.0 kDa protein precursor - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV) Length = 529 Score = 107 bits (256), Expect = 3e-22 Identities = 45/84 (53%), Positives = 55/84 (65%) Frame = +2 Query: 257 SCFFPGVGRCILADPDACIRRHGGFFVWTAETFTNSWCILSREDTHIKIWSSASRYPRGD 436 +CFFPG GRCI+ + + CIRRH VWTAETFT SWC+LSR+ IK+WS A RYPRG Sbjct: 420 ACFFPGEGRCIVHNSETCIRRHANGQVWTAETFTGSWCVLSRDGAAIKVWSRAERYPRGA 479 Query: 437 APAVXXXXXXXXXXXXEQNTIRTI 508 APA E+NT+R + Sbjct: 480 APAALRLRGFFFNNDRERNTVRVV 503 Score = 100 bits (240), Expect = 3e-20 Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 4/87 (4%) Frame = +3 Query: 3 KYFWGRRDHTEFSDADVVFQANANQLSHERYQAILYPLL----GSTEIVPAGTGVMKISV 170 K+FW R DH E +DADVVFQA+ QLSHERY+A+LYPLL T +V + V+KISV Sbjct: 331 KFFWARPDHDEVADADVVFQADERQLSHERYRAMLYPLLRFHPEETSLVWGDSRVLKISV 390 Query: 171 SYDTTLKDMRLPFSIFRIFRLKESSTS 251 SYDT LK+ LP S+F++F+ KE +TS Sbjct: 391 SYDTVLKNALLPPSLFQLFKRKERATS 417 Score = 36.3 bits (80), Expect = 0.73 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +1 Query: 508 STGAMTQGQQIDALTQILQTYPNYSL 585 +TG M G Q DALTQ+L T+ NYS+ Sbjct: 504 NTGDMASGAQTDALTQVLDTFSNYSV 529 >UniRef50_Q8V5Q2 Cluster: ORF114; n=4; Nucleopolyhedrovirus|Rep: ORF114 - Helicoverpa zea SNPV Length = 528 Score = 96.7 bits (230), Expect = 5e-19 Identities = 39/63 (61%), Positives = 48/63 (76%) Frame = +2 Query: 260 CFFPGVGRCILADPDACIRRHGGFFVWTAETFTNSWCILSREDTHIKIWSSASRYPRGDA 439 CF PGVGRCI+A+P+ CIRRH F VWTAETF+NSWCI SRE+ HI+ W + +P G Sbjct: 415 CFAPGVGRCIVANPNYCIRRHANFQVWTAETFSNSWCIFSRENNHIRSWHPSRIFPDGRY 474 Query: 440 PAV 448 P+V Sbjct: 475 PSV 477 >UniRef50_Q9YMH3 Cluster: LdOrf-155 peptide; n=1; Lymantria dispar MNPV|Rep: LdOrf-155 peptide - Lymantria dispar multicapsid nuclear polyhedrosis virus (LdMNPV) Length = 530 Score = 70.9 bits (166), Expect = 3e-11 Identities = 31/62 (50%), Positives = 40/62 (64%) Frame = +2 Query: 260 CFFPGVGRCILADPDACIRRHGGFFVWTAETFTNSWCILSREDTHIKIWSSASRYPRGDA 439 CF PG GRC+L +P+ CIRRH G VW AE +CI SR+ HI+ W +A+ Y +A Sbjct: 415 CFTPGTGRCVLINPNYCIRRHTGAQVWLAE--AAHYCIFSRQGAHIRAWRNATNYLIWEA 472 Query: 440 PA 445 PA Sbjct: 473 PA 474 >UniRef50_Q0N3Y2 Cluster: PIF-1; n=2; Nucleopolyhedrovirus|Rep: PIF-1 - Clanis bilineata nucleopolyhedrosis virus Length = 538 Score = 68.9 bits (161), Expect = 1e-10 Identities = 29/56 (51%), Positives = 36/56 (64%) Frame = +2 Query: 281 RCILADPDACIRRHGGFFVWTAETFTNSWCILSREDTHIKIWSSASRYPRGDAPAV 448 RCI CI R+ G VW AET N+WC++SR+ I+IWSS +RYPRG P V Sbjct: 436 RCINDSSFKCINRYPGSTVWLAETLNNAWCVISRQGWAIRIWSSPTRYPRGQFPMV 491 Score = 34.7 bits (76), Expect = 2.2 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 3 KYFWGRRDHTEFSDADV-VFQANANQLSHERYQAILYPLL 119 + FWGR D D V V + N +SH+RY+ +L PLL Sbjct: 333 RVFWGRDDEYVSDDEIVAVVNKDVNVMSHQRYENLLKPLL 372 >UniRef50_Q6QNZ9 Cluster: PIF; n=3; Nucleopolyhedrovirus|Rep: PIF - Spodoptera frugiperda nuclear polyhedrosis virus (SfNPV) Length = 529 Score = 62.1 bits (144), Expect = 1e-08 Identities = 28/60 (46%), Positives = 35/60 (58%) Frame = +2 Query: 245 HFSASCFFPGVGRCILADPDACIRRHGGFFVWTAETFTNSWCILSREDTHIKIWSSASRY 424 H SA+CF+PG GRC++ D CIRR G V TAE + C LSR+ I+IW Y Sbjct: 412 HRSATCFYPGFGRCVVHDHTNCIRRFGSVQVGTAENLKGTQCYLSRDRWWIRIWYKPQVY 471 Score = 37.5 bits (83), Expect = 0.32 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = +3 Query: 3 KYFWGRRDHTEFSDADVVFQANANQLSHERYQAILYPLLGSTEIVPAGTG--VMKISVSY 176 K+FWG+R+ SD DVV +Q+S RY+ +L+ L P VMK S +Y Sbjct: 331 KWFWGQRN-LYTSDDDVVATVRPDQISSPRYRRMLFTYLTPHPFFPESVNFMVMKFSTAY 389 >UniRef50_Q0IKX1 Cluster: ORF148; n=1; Leucania separata nuclear polyhedrosis virus|Rep: ORF148 - Leucania separata nuclear polyhedrosis virus (LsNPV) Length = 528 Score = 47.6 bits (108), Expect = 3e-04 Identities = 24/55 (43%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +2 Query: 254 ASCFFPGVGRCILADPDACIRRHGGFFVWTAETFTNSWCILSR-EDTHIKIWSSA 415 A CF PGVGRC+ CIR H F V E TN CI +R + I W A Sbjct: 414 AGCFIPGVGRCVRHHNSPCIRYHRRFVVEQTENATNDLCIFTRLSNRKIVCWHLA 468 Score = 40.7 bits (91), Expect = 0.034 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +3 Query: 3 KYFWGRRDHTEFSDADVVFQANANQLSHERYQAILYPLLG---STEIVPAGTGVMKISVS 173 + FWGR H E SD D+V + + HERY+ LYP L T P + ++K S++ Sbjct: 329 RVFWGRLPH-ELSDDDIVATVRPSDV-HERYRLALYPYLQFGLPTTQYPQQSHILKFSIA 386 Query: 174 Y 176 Y Sbjct: 387 Y 387 >UniRef50_O10359 Cluster: Uncharacterized 9.3 kDa protein; n=12; Nucleopolyhedrovirus|Rep: Uncharacterized 9.3 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV) Length = 82 Score = 39.9 bits (89), Expect = 0.060 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +1 Query: 634 HTLF*KLGYLFRAKTCLDIALDN 702 H +F KLGYLFRA+ CLDIAL N Sbjct: 13 HAVFAKLGYLFRARVCLDIALAN 35 >UniRef50_Q0LEB1 Cluster: Glycosyl transferase, group 1; n=1; Herpetosiphon aurantiacus ATCC 23779|Rep: Glycosyl transferase, group 1 - Herpetosiphon aurantiacus ATCC 23779 Length = 399 Score = 34.3 bits (75), Expect = 3.0 Identities = 22/79 (27%), Positives = 40/79 (50%) Frame = +3 Query: 12 WGRRDHTEFSDADVVFQANANQLSHERYQAILYPLLGSTEIVPAGTGVMKISVSYDTTLK 191 WGR+ H + +A F+A+ + H +YQ Y + + ++PA +SV TL Sbjct: 60 WGRKLHQDVRNAAKQFEAD---IVHIQYQTGAYEMKPAVNLLPAA-----LSVPSVVTLH 111 Query: 192 DMRLPFSIFRIFRLKESST 248 D+R+P+ ++ L+ T Sbjct: 112 DLRMPYLAPKVAPLRRYVT 130 >UniRef50_A6PLD5 Cluster: Inosine/uridine-preferring nucleoside hydrolase; n=2; Victivallis vadensis ATCC BAA-548|Rep: Inosine/uridine-preferring nucleoside hydrolase - Victivallis vadensis ATCC BAA-548 Length = 311 Score = 33.5 bits (73), Expect = 5.2 Identities = 17/28 (60%), Positives = 17/28 (60%) Frame = -1 Query: 551 VNASICCPWVMAPVESFLLCFVRDGRPE 468 VNASIC PW A V FL F GRPE Sbjct: 37 VNASICSPWPAAAVRGFLQVF---GRPE 61 >UniRef50_Q17MG4 Cluster: Ikappab kinase complex-associated protein; n=2; Culicidae|Rep: Ikappab kinase complex-associated protein - Aedes aegypti (Yellowfever mosquito) Length = 1269 Score = 33.1 bits (72), Expect = 6.8 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Frame = +1 Query: 193 ICDYHFLFLGYLDLKKVALLGV---MLLSRRRTVHTCRSRCVHQATRWIFRVD 342 IC+YH+ Y + ++ ++G+ + S RRT+H ++A+RW F VD Sbjct: 318 ICNYHWYIKQYQEFEQ-DIIGIQWDLKYSERRTLHVLLKDGHYEASRWDFSVD 369 >UniRef50_Q6CDQ9 Cluster: Similar to DEHA0C03773g Debaryomyces hansenii IPF 2291.1; n=1; Yarrowia lipolytica|Rep: Similar to DEHA0C03773g Debaryomyces hansenii IPF 2291.1 - Yarrowia lipolytica (Candida lipolytica) Length = 841 Score = 33.1 bits (72), Expect = 6.8 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 4/46 (8%) Frame = +1 Query: 412 RVTISTRRRACSVKIAR----LFSGRPSRTKHNKNDSTGAMTQGQQ 537 RVT+ RR+ +VK+ R +F G S KHNK+D T M +GQ+ Sbjct: 768 RVTMGPLRRSHTVKVMRDGEEVFRGTVSSLKHNKDDVT-EMAKGQE 812 >UniRef50_Q0FED9 Cluster: Transcriptional regulator, AraC family protein; n=1; alpha proteobacterium HTCC2255|Rep: Transcriptional regulator, AraC family protein - alpha proteobacterium HTCC2255 Length = 318 Score = 32.7 bits (71), Expect = 9.0 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 581 LYNNNMSILNVVEACDFGTHFFKNWVIYLG 670 L N +MSIL + AC FG++F K + Y G Sbjct: 277 LVNTDMSILEIAAACGFGSNFGKIYKAYYG 306 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 766,671,854 Number of Sequences: 1657284 Number of extensions: 15931432 Number of successful extensions: 37886 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 36710 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 37880 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 56198352344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -