Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120138.Seq
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   5.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.8  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   7.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   7.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 507 SYRHLTDFFSCRFFFVLFYCLS 442
           SY+    F +C  FFV+   +S
Sbjct: 126 SYKRTQIFITCELFFVILLWIS 147


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 578 LCYLSRLVCWVEHHSILIHTGQ 513
           LC +S L C++E   +L  +G+
Sbjct: 226 LCVVSTLSCYLERTELLRSSGE 247


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 308 DFSPYKLNYLIN*ERKLSRVGRKRARPHP 222
           DF P  L+ L++  +K   +G    R HP
Sbjct: 165 DFQPEALHLLVDYMKKNKTLGAACGRIHP 193


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 308 DFSPYKLNYLIN*ERKLSRVGRKRARPHP 222
           DF P  L+ L++  +K   +G    R HP
Sbjct: 479 DFQPEALHLLVDYMKKNKTLGAACGRIHP 507


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 308 DFSPYKLNYLIN*ERKLSRVGRKRARPHP 222
           DF P  L+ L++  +K   +G    R HP
Sbjct: 712 DFQPEALHLLVDYMKKNKTLGAACGRIHP 740


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 308 DFSPYKLNYLIN*ERKLSRVGRKRARPHP 222
           DF P  L+ L++  +K   +G    R HP
Sbjct: 712 DFQPEALHLLVDYMKKNKTLGAACGRIHP 740


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 414 KQNCSTETYFEECV 373
           ++NC T  YF+ C+
Sbjct: 86  RKNCFTTDYFKGCI 99


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 414 KQNCSTETYFEECV 373
           ++NC T  YF+ C+
Sbjct: 86  RKNCFTTDYFKGCI 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,537
Number of Sequences: 336
Number of extensions: 2380
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)