Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120138.Seq
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14823-1|CAA75100.1|  270|Drosophila melanogaster SURF-4 protein...    30   2.8  
AY118406-1|AAM48435.1|  270|Drosophila melanogaster RE62265p pro...    30   2.8  
AE014297-2017|AAN13656.1|  270|Drosophila melanogaster CG6202-PB...    30   2.8  
AE014297-2016|AAF55176.1|  270|Drosophila melanogaster CG6202-PA...    30   2.8  

>Y14823-1|CAA75100.1|  270|Drosophila melanogaster SURF-4 protein
           protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 570 LV*TSLLGRTPLYFNTHWTNTSYRHLTDFFSCRFFFVL 457
           L+  +LL    LY N  WT  SY+ L DF    FF  L
Sbjct: 207 LILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTL 244


>AY118406-1|AAM48435.1|  270|Drosophila melanogaster RE62265p
           protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 570 LV*TSLLGRTPLYFNTHWTNTSYRHLTDFFSCRFFFVL 457
           L+  +LL    LY N  WT  SY+ L DF    FF  L
Sbjct: 207 LILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTL 244


>AE014297-2017|AAN13656.1|  270|Drosophila melanogaster CG6202-PB,
           isoform B protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 570 LV*TSLLGRTPLYFNTHWTNTSYRHLTDFFSCRFFFVL 457
           L+  +LL    LY N  WT  SY+ L DF    FF  L
Sbjct: 207 LILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTL 244


>AE014297-2016|AAF55176.1|  270|Drosophila melanogaster CG6202-PA,
           isoform A protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 570 LV*TSLLGRTPLYFNTHWTNTSYRHLTDFFSCRFFFVL 457
           L+  +LL    LY N  WT  SY+ L DF    FF  L
Sbjct: 207 LILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTL 244


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,662,637
Number of Sequences: 53049
Number of extensions: 376778
Number of successful extensions: 727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)