Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120137.Seq
         (728 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g49110.1 68416.m05364 peroxidase 33 (PER33) (P33) (PRXCA) / n...    29   4.2  
At3g32980.1 68416.m04183 peroxidase 32 (PER32) (P32) (PRXR3) ide...    27   9.6  

>At3g49110.1 68416.m05364 peroxidase 33 (PER33) (P33) (PRXCA) /
           neutral peroxidase C (PERC) identical to SP|P24101
           Peroxidase 33 precursor (EC 1.11.1.7) (Atperox P33)
           (ATPCa) (Neutral peroxidase C) (PERC) {Arabidopsis
           thaliana}
          Length = 354

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 27  RCYSFTVEVIPEHLLSTYFIGKV-GTCLRDSNTGTVSSLDTNSPVVLSRR 173
           R Y+F+   +P+  L+T ++  + G C R+ N   +   D  +P+V   +
Sbjct: 214 RLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNK 263


>At3g32980.1 68416.m04183 peroxidase 32 (PER32) (P32) (PRXR3)
           identical to SP|Q9LHB9 Peroxidase 32 precursor (EC
           1.11.1.7) (Atperox P32) (PRXR3) (ATP16a) {Arabidopsis
           thaliana}
          Length = 352

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 27  RCYSFTVEVIPEHLLSTYFIGKV-GTCLRDSNTGTVSSLDTNSPVVLSRR 173
           R Y+F+   +P+  L+T ++  + G C R+ N   +   D  +P V   +
Sbjct: 212 RLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNK 261


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,127
Number of Sequences: 28952
Number of extensions: 280730
Number of successful extensions: 462
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)