Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120134.Seq
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069445-1|AAL39590.1|  501|Drosophila melanogaster LD15939p pro...    31   1.8  
AE014297-3227|AAF56057.2|  501|Drosophila melanogaster CG6985-PA...    31   1.8  
AE013599-3313|AAF46788.1|  404|Drosophila melanogaster CG13500-P...    29   5.4  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   7.2  

>AY069445-1|AAL39590.1|  501|Drosophila melanogaster LD15939p
           protein.
          Length = 501

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
 Frame = +2

Query: 20  QSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQF-CNDPHLCKIIENN- 193
           QS+++CL     + K+ +L +SEYA          K     IFQ  C+ P L K +  N 
Sbjct: 231 QSEYLCLLTPAELQKKILLFVSEYAQTSKTESSTLK----EIFQIVCDHPVLLKTLGTNP 286

Query: 194 -YNYCMQIFKA-----PADNMCD-----IRHILNAHSKRQCWATCVCLATNRQCIRFLKN 340
            +   M++  A     P+  + D       H++  H   +    C  LA +  C+  ++ 
Sbjct: 287 VFKEIMEVLDAILPPWPSMGLYDSAKFEFLHVMLDHLVAERGEKCCILANSEDCLTLVR- 345

Query: 341 GFCCHTTKWSLSKANL 388
           G+C     +SL  A L
Sbjct: 346 GYC---QSYSLDHAQL 358


>AE014297-3227|AAF56057.2|  501|Drosophila melanogaster CG6985-PA
           protein.
          Length = 501

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
 Frame = +2

Query: 20  QSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQF-CNDPHLCKIIENN- 193
           QS+++CL     + K+ +L +SEYA          K     IFQ  C+ P L K +  N 
Sbjct: 231 QSEYLCLLTPAELQKKILLFVSEYAQTSKTESSTLK----EIFQIVCDHPVLLKTLGTNP 286

Query: 194 -YNYCMQIFKA-----PADNMCD-----IRHILNAHSKRQCWATCVCLATNRQCIRFLKN 340
            +   M++  A     P+  + D       H++  H   +    C  LA +  C+  ++ 
Sbjct: 287 VFKEIMEVLDAILPPWPSMGLYDSAKFEFLHVMLDHLVAERGEKCCILANSEDCLTLVR- 345

Query: 341 GFCCHTTKWSLSKANL 388
           G+C     +SL  A L
Sbjct: 346 GYC---QSYSLDHAQL 358


>AE013599-3313|AAF46788.1|  404|Drosophila melanogaster CG13500-PA
           protein.
          Length = 404

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +2

Query: 29  WICLRLNDAIIKRHVLVLSEY--ADLKYLGFEKYKFFE 136
           W  LRL++  I RHVL+L  +  A   YLG  + ++ E
Sbjct: 4   WHSLRLSNRYISRHVLLLLRFYLAQFYYLGLMRLRYDE 41


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 518  NATLSCNSCKLSYTNESRI*ICSSSVMRVLSKSNTTTC 405
            + T +C SC  + T  S    C+S       +S TTTC
Sbjct: 946  STTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTC 983


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,983,597
Number of Sequences: 53049
Number of extensions: 817404
Number of successful extensions: 2141
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2139
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)