Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120132.Seq
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   0.50 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.1  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 248 PISTYHTCYLIIHPTIFSKN 307
           P S   TCY II  TI+SKN
Sbjct: 197 PASIIATCYAIIIITIWSKN 216


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 215 HRAPHICAQFY 183
           H  PHIC +FY
Sbjct: 116 HEEPHICDKFY 126


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 498 YRIVAHQQAGHHVKLAAVLR 439
           +R+VA ++ G HV ++ +L+
Sbjct: 541 FRVVAMERVGSHVNVSEILK 560



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 200 YVVRGGNHDDPHAKRY 247
           ++VR    D+PHAK Y
Sbjct: 193 FIVRVPEEDNPHAKLY 208


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 581 IIVPVEEITFDFGQNKITD 637
           ++VP + + FDFG++ I +
Sbjct: 599 VMVPPQILPFDFGEDSINE 617



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 504  FHYRIVAHQQAGHHV 460
            +H R+ AH  AG +V
Sbjct: 1560 YHLRVTAHNNAGFNV 1574


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 537 YHVCNRARVIIFH 499
           Y+VCN    +IFH
Sbjct: 154 YYVCNTTIFLIFH 166


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 478 LMCNNTIMKNYNSCTIANMIKLYLCTKTVCQWGNNNRTR 594
           L+  + +M   ++CTIA+   +  C K   Q+  N+  R
Sbjct: 288 LVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVR 326


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 478 LMCNNTIMKNYNSCTIANMIKLYLCTKTVCQWGNNNRTR 594
           L+  + +M   ++CTIA+   +  C K   Q+  N+  R
Sbjct: 288 LVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVR 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,692
Number of Sequences: 336
Number of extensions: 4489
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)