Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120132.Seq
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0802 - 28155281-28155725,28155750-28156081,28156164-281562...    30   1.7  
11_06_0738 - 26807046-26807129,26807720-26807957,26809374-268115...    30   2.3  
08_02_1540 + 27694565-27694579,27696364-27696447,27696599-276967...    29   3.1  
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602...    28   7.1  
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468           28   9.3  

>04_04_0802 -
           28155281-28155725,28155750-28156081,28156164-28156266,
           28156347-28156528,28156617-28156800,28156872-28156960,
           28157634-28157710,28157837-28157927,28158230-28158430
          Length = 567

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 155 SFLSRQSNFDKIERKYVVRGGNHDDPHAKRYPISTYHTCY-LIIHPTIFSKNLLKQTTLD 331
           SF+S  SN  KI R+   R G    P+  R P      CY   + P +  K++++ T  D
Sbjct: 163 SFISSLSNDVKIIRQVPDRNGKTPYPYKMRIPRKCTAKCYENRVLPALLKKHVVQLTKFD 222

Query: 332 TKKSKVL 352
            + S  L
Sbjct: 223 YRVSNRL 229


>11_06_0738 - 26807046-26807129,26807720-26807957,26809374-26811509,
            26812145-26813253
          Length = 1188

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 513  VIIFHYRIVAHQQAGHHVKL-AAVLRQVGPAAHPMQTFRH 397
            V+I+  R    Q +  H +  AAV R  GPAA P +T RH
Sbjct: 1107 VLIYDARTKISQSSSMHSEFWAAVQRLTGPAATPAKTKRH 1146


>08_02_1540 +
           27694565-27694579,27696364-27696447,27696599-27696731,
           27696840-27696951,27697530-27697629,27697810-27697937,
           27698046-27698115,27698548-27698636,27698719-27698764,
           27698854-27698924,27699002-27699075,27699341-27699433,
           27699539-27699572,27699704-27699789,27702147-27702223,
           27702445-27702533,27702630-27702813,27703068-27703249,
           27703962-27704064,27704159-27704490,27704577-27705018,
           27705749-27705846,27706988-27707081,27707666-27707787,
           27708025-27708078,27708185-27708304,27708595-27708799,
           27708889-27709059,27709155-27709310,27709375-27709431,
           27709474-27709580,27709708-27709798,27709931-27710072,
           27710149-27710305,27710400-27710516,27710596-27710722,
           27710844-27711066,27711460-27711466,27711656-27711788
          Length = 1574

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 158 FLSRQSNFDKIERKYVVRGGNHDDPHAKRYPISTYHTCYL-IIHPTIFSKNLLKQTTLD 331
           F+S  S   KI ++    GG    PH  R P      CY+  + P +  K++++ T  D
Sbjct: 445 FISNLSKDVKIVKELPEIGGKLRTPHRMRVPRKCTQRCYVNRVLPALLKKHVVRLTKFD 503


>08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,
            6027187-6027258,6027354-6027425,6027784-6027855,
            6027980-6028051,6028134-6028205,6028483-6028554,
            6028791-6028865,6028970-6029041,6029134-6029199,
            6029267-6029332,6029409-6029453,6029542-6029606,
            6029697-6030076,6030455-6030653,6030725-6030883,
            6030966-6031084,6031156-6031200,6031226-6031791,
            6031871-6032021,6032117-6032454,6033702-6033765,
            6034329-6034370,6035572-6035575,6035853-6036039,
            6037252-6037323,6037687-6037758,6037867-6037938,
            6038019-6038090,6038651-6038725,6038815-6038886,
            6038988-6039053,6039163-6039228,6039348-6039392,
            6039469-6039533,6039615-6039994,6040070-6040202,
            6040354-6040512,6040599-6040717,6040805-6041015,
            6041155-6041386,6041469-6041619,6041725-6042084
          Length = 1952

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 98   LTEWMAEDGTHAQICLSPVSFLSRQSNFDKIERKYVVRGGNHD 226
            +TEW   DG       S  S  SRQ   D +     + G +HD
Sbjct: 1004 ITEWQYRDGNSTN-SESTTSEFSRQKEIDPLTMSPTITGSSHD 1045


>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
          Length = 1078

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 512 TLARLQT**NYICARKQCVNGEIIIVPVEEITFDFGQNKITDAVIKL 652
           TLA+L+T  N IC    C +G  +   V+E      Q +I D   KL
Sbjct: 722 TLAKLKTKENLICLELWCTSGVTVSGRVKESIAMADQEQIVDVFDKL 768


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,460,168
Number of Sequences: 37544
Number of extensions: 428961
Number of successful extensions: 1167
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)