Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120132.Seq
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.77 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   4.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 219 FPPRTTYLRSILSKLDWRDKNETGDKHIWACVPSSAIH 106
           +PP +  +R  +S   + D   T  K +   +P+ AIH
Sbjct: 367 YPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIH 404


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 661  VNI*FYNSVGNFILTKIKGDLFDGYDY 581
            +N  FY    + +L K +   FDG DY
Sbjct: 1433 INNVFYEDETSCMLDKTRAQTFDGKDY 1459


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 523 IANMIKLYLCTKTVCQWGNNNRTRRRDHL 609
           + N+IK   C K+  Q  N N+ + + HL
Sbjct: 408 VNNLIKNTRCAKSNNQNNNQNKYKNQAHL 436


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -2

Query: 186 LSKLDWRDKNETGDKHIWACVPSSA 112
           L  L W   N  G   +W+ VP  A
Sbjct: 84  LGFLAWAKHNPRGKDALWSLVPHMA 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,260
Number of Sequences: 438
Number of extensions: 4873
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)