Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120132.Seq
         (763 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont...    28   5.9  
At5g07940.1 68418.m00920 expressed protein                             28   5.9  

>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related
           contains weak similarity to Swiss-Prot:Q9NZW4 dentin
           sialophosphoprotein precursor [Homo sapiens]
          Length = 1501

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 322 HTGHEK--VEGTRFDQWTKNQSFVGNRMSESLHWMRGGSNL 438
           HTG EK     +RF  W  NQSF  +        + GGSN+
Sbjct: 862 HTGPEKGGTSQSRFAPWGSNQSFHQSTHQGPFPGILGGSNM 902


>At5g07940.1 68418.m00920 expressed protein
          Length = 1526

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 322  HTGHEK--VEGTRFDQWTKNQSFVGNRMSESLHWMRGGSNL 438
            HTG EK     +RF  W  NQS+  +        + GGSN+
Sbjct: 895  HTGPEKGGTSQSRFAPWASNQSYQQSTHQGPFPGILGGSNM 935


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,740,242
Number of Sequences: 28952
Number of extensions: 356352
Number of successful extensions: 985
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)