Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120131X.Seq
(378 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34; Nuc... 87 1e-16
UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic... 71 5e-12
UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: G... 43 0.002
UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.003
UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.062
UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1; ... 36 0.19
UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 - A... 36 0.33
UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15; Pseudomon... 35 0.58
UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cyd... 34 1.0
UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2; ... 34 1.0
UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_A7AWF9 Cluster: Putative uncharacterized protein; n=2; ... 33 1.3
UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI... 33 2.3
UniRef50_A0VCF5 Cluster: PilL; n=2; Comamonadaceae|Rep: PilL - D... 33 2.3
UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2; Desulfov... 33 2.3
UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n... 32 3.1
UniRef50_A2F6N6 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_P18753 Cluster: Oocyte zinc finger protein XlCOF8.4; n=... 32 3.1
UniRef50_UPI0000DA3B14 Cluster: PREDICTED: hypothetical protein;... 32 4.1
UniRef50_Q2S867 Cluster: Predicted phosphatase; n=1; Hahella che... 32 4.1
UniRef50_Q2CFY8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal... 31 5.4
UniRef50_Q1JZ98 Cluster: Sec-independent protein translocase Tat... 31 5.4
UniRef50_A7GSR3 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_O75382-3 Cluster: Isoform Gamma of O75382 ; n=9; Eutele... 31 7.1
UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum granuloviru... 31 7.1
UniRef50_Q8IYN4 Cluster: Hexosaminidase domain-containing protei... 31 7.1
UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular o... 31 7.1
UniRef50_O75382 Cluster: Tripartite motif-containing protein 3; ... 31 7.1
UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_0086... 31 9.4
UniRef50_UPI00006A1F54 Cluster: UPI00006A1F54 related cluster; n... 31 9.4
UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 31 9.4
UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain prot... 31 9.4
UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain prot... 31 9.4
UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain prot... 31 9.4
UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain prote... 31 9.4
UniRef50_A0FYB0 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_A0DH71 Cluster: Chromosome undetermined scaffold_50, wh... 31 9.4
>UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34;
Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 409
Score = 87.0 bits (206), Expect = 1e-16
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = +2
Query: 2 KNACQDSLTELAFQNETLRRFIFQQINYNKDXXXXXXXXXPNVTRPNTKGRT 157
K+ACQ+SLTELAFQNETLRRFIFQQINYNKD PN TRPNTKGRT
Sbjct: 357 KSACQESLTELAFQNETLRRFIFQQINYNKDANAIIAAAAPNATRPNTKGRT 408
>UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic
region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein
in VLF1-GP41 intergenic region - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 104
Score = 71.3 bits (167), Expect = 5e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 166 MATTLYTNKVWCVYILRQDNGKLYTGITSNL 258
MATTLYTNKVWCVYILRQDNGKLYTGITSNL
Sbjct: 1 MATTLYTNKVWCVYILRQDNGKLYTGITSNL 31
Score = 67.3 bits (157), Expect = 9e-11
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +3
Query: 228 KIVHGHHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSA 344
K+ G LNRRIKQHSNKQGAKC RNATNLRLVYHSA
Sbjct: 22 KLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA 60
>UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: Gp41
- Ecotropis obliqua NPV
Length = 338
Score = 43.2 bits (97), Expect = 0.002
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 20 SLTELAFQNETLRRFIFQQINYNKD 94
SLTE+AFQNE LRRFIFQQ++Y +
Sbjct: 308 SLTEMAFQNEALRRFIFQQLSYKNN 332
>UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 135
Score = 42.3 bits (95), Expect = 0.003
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 175 TLYTNKVWCVYILRQDNGKLYTGITSNL 258
++YT +WC+Y++R G +YTGITSN+
Sbjct: 9 SVYTKNIWCLYMIRMPCGSIYTGITSNV 36
Score = 32.7 bits (71), Expect = 2.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 231 IVHGHHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHS 341
I G +++R KQH + GAKC R+ T L VY S
Sbjct: 28 IYTGITSNVDKRFKQHCDGTGAKCLRSKTPLVKVYSS 64
>UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 96
Score = 37.9 bits (84), Expect = 0.062
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +1
Query: 178 LYTNKVWCVYILRQDNGKLYTGITSNL 258
++ + WCVYI+R NG+LYTG+++ +
Sbjct: 1 MFKSNSWCVYIIRMPNGRLYTGMSNRV 27
Score = 33.9 bits (74), Expect = 1.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 228 KIVHGHHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTK 362
++ G ++ R + H N +GAKC R T L LVY + T K
Sbjct: 18 RLYTGMSNRVLNRFRDHCNGRGAKCLRGKTPLALVYKTESCLTRK 62
>UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1;
Spodoptera frugiperda ascovirus 1a|Rep: 13 kDa
GIY-YIG-like endonuclease - Spodoptera frugiperda
ascovirus 1a
Length = 112
Score = 36.3 bits (80), Expect = 0.19
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 231 IVHGHHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHS 341
I G + + RR K H + +GAKC R A LRL++ S
Sbjct: 19 IYTGASKDVERRFKMHCSGRGAKCLRGAQGLRLIWTS 55
>UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 309
Score = 35.5 bits (78), Expect = 0.33
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 14 QDSLTELAFQNETLRRFIFQQIN 82
Q+SLTELAF+NE LRR + Q +N
Sbjct: 280 QESLTELAFENEALRRGLIQDLN 302
>UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15;
Pseudomonas|Rep: UPF0213 protein PA3854 - Pseudomonas
aeruginosa
Length = 104
Score = 34.7 bits (76), Expect = 0.58
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 169 ATTLYTNKVWCVYILRQDNGKLYTGITSNLTDA*NSIRTNKAPSVFATQP----IYGSCI 336
A T K W VY++R +NG LY GI+ + ++ + K F + P +Y
Sbjct: 6 AATAAIGKCWSVYLVRAENGALYCGISDDPLRRFDTHCSGKGARFFHSSPARALVYVEAC 65
Query: 337 TARGVRLQNRR 369
++G L+ R
Sbjct: 66 ASKGDALRRER 76
>UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cydia
pomonella granulovirus|Rep: ORF65 similar to AcMNPV
ORF79 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 79
Score = 33.9 bits (74), Expect = 1.0
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +1
Query: 196 WCVYILRQDNGKLYTGITSNL 258
WCVY++R +G LYTG+++N+
Sbjct: 7 WCVYMVRTPDGALYTGMSNNV 27
>UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 98
Score = 33.9 bits (74), Expect = 1.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 193 VWCVYILRQDNGKLYTGITSNLT 261
+WC+Y++R LYTGIT N++
Sbjct: 1 MWCLYLIRAKGDMLYTGITKNIS 23
>UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 88
Score = 33.9 bits (74), Expect = 1.0
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 190 KVWCVYILRQDNGKLYTGITSNL 258
K W +YI+ ++GKLYTGIT+++
Sbjct: 5 KTWWLYIVETESGKLYTGITTDV 27
>UniRef50_A7AWF9 Cluster: Putative uncharacterized protein; n=2;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 250
Score = 33.5 bits (73), Expect = 1.3
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -2
Query: 287 FVRMLFYASVKLLVMPVYNFPLSCRRMYTHHTLLVYRVVAMIIQCV---LSCLA 135
F+R F + L++ V + +SC+R H+ + + ++A++ C+ L+C A
Sbjct: 72 FIRNYFIGIIALVIFLVVSIVISCKRSLAHNKTVAFSLLALMTTCMALYLTCFA 125
>UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI
domain; n=1; Hahella chejuensis KCTC 2396|Rep: Predicted
endonuclease containing a URI domain - Hahella
chejuensis (strain KCTC 2396)
Length = 105
Score = 32.7 bits (71), Expect = 2.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 196 WCVYILRQDNGKLYTGITSN 255
WCVY+L + LYTGIT+N
Sbjct: 11 WCVYMLLVSDNSLYTGITNN 30
>UniRef50_A0VCF5 Cluster: PilL; n=2; Comamonadaceae|Rep: PilL -
Delftia acidovorans SPH-1
Length = 563
Score = 32.7 bits (71), Expect = 2.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 135 GQTRKDALYNHGDDSVHQQGVVRVHSAAGQWKIVHGHHEQLNRRIKQHSNK-QGAKC 302
G ++D +H D + H Q V+R H AA + HH+ QH + GA+C
Sbjct: 365 GPQQRDQREDHEDLAEHGQHVLRAHQAAVEQCQARDHHQDHQHGRGQHPGRVTGAEC 421
>UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: UPF0213
protein DVU_3309 - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 110
Score = 32.7 bits (71), Expect = 2.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 187 NKVWCVYILRQDNGKLYTGITSNL 258
++VW VY+LR +G LY G+T+N+
Sbjct: 7 DEVWFVYLLRCADGTLYCGVTNNI 30
>UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n=1;
Shewanella amazonensis SB2B|Rep: Endonuclease containing
a URI domain - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B)
Length = 106
Score = 32.3 bits (70), Expect = 3.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 193 VWCVYILRQDNGKLYTGITSNL 258
+W +YI+R G+LYTG+T+N+
Sbjct: 4 IWQLYIIRCATGELYTGVTTNV 25
>UniRef50_A2F6N6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1429
Score = 32.3 bits (70), Expect = 3.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 184 TNKVWCVYILRQDNGKLYTGITSNLTDA*NSIRTNKAPSVF 306
+N VYI +Q N YTGI NLT + N + N P+ F
Sbjct: 1235 SNFAMVVYISKQPNKNFYTGIQFNLTFSPNVMSQNLIPNNF 1275
>UniRef50_P18753 Cluster: Oocyte zinc finger protein XlCOF8.4; n=19;
Xenopus|Rep: Oocyte zinc finger protein XlCOF8.4 -
Xenopus laevis (African clawed frog)
Length = 780
Score = 32.3 bits (70), Expect = 3.1
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 246 HEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
H + + R+K S Q KCF N T L+ YH T KP
Sbjct: 268 HRRTHTRVKPFSCSQCGKCFSNQTKLK--YHHRTHTGEKP 305
>UniRef50_UPI0000DA3B14 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 169
Score = 31.9 bits (69), Expect = 4.1
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -3
Query: 310 LRKHLAPCLFECCFMRLLSCS*CPCTIFHCPAAECTRTTPCWCTESSP*LYSASFRVW 137
L+++ AP L +C + +L CS PC+ C +A C+ C S+P L ++ V+
Sbjct: 89 LQRYSAPVL-QCSSVPVLQCSSAPCSSAPCSSAPCSSAPVLQCC-SAPVLQCSNVAVF 144
>UniRef50_Q2S867 Cluster: Predicted phosphatase; n=1; Hahella
chejuensis KCTC 2396|Rep: Predicted phosphatase -
Hahella chejuensis (strain KCTC 2396)
Length = 656
Score = 31.9 bits (69), Expect = 4.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 165 HGDDSVHQQGVVRVHSAAGQWKIVHGHHEQLNRRI 269
H + + H V+ + AG W IVHG Q NRR+
Sbjct: 185 HKEVAAHGVSVIHIKKTAGVWDIVHG--SQYNRRV 217
>UniRef50_Q2CFY8 Cluster: Putative uncharacterized protein; n=1;
Oceanicola granulosus HTCC2516|Rep: Putative
uncharacterized protein - Oceanicola granulosus HTCC2516
Length = 188
Score = 31.9 bits (69), Expect = 4.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 168 GDDSVHQQGVVRVHSAAGQWKIVHG 242
GDD VH+ G+V V +AAG ++HG
Sbjct: 139 GDDLVHEVGIVTVRAAAGFRLVLHG 163
>UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 114
Score = 31.9 bits (69), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 240 GHHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRT 353
G LN+RIK H++ +GAK + ++LVY+ T
Sbjct: 17 GWTNDLNKRIKAHNSGKGAKYTKTRRPVKLVYYEEHET 54
>UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Thermoanaerobacter ethanolicus ATCC 33223|Rep:
Excinuclease ABC, C subunit, N-terminal -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 107
Score = 31.5 bits (68), Expect = 5.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 178 LYTNKVWCVYILRQDNGKLYTGITSNLTD 264
L K++ VY+L + GK+Y G TSN+ +
Sbjct: 18 LEEGKMYYVYVLANEKGKIYIGYTSNIKE 46
>UniRef50_Q1JZ98 Cluster: Sec-independent protein translocase TatC;
n=3; Desulfuromonadales|Rep: Sec-independent protein
translocase TatC - Desulfuromonas acetoxidans DSM 684
Length = 258
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -2
Query: 290 LFVRMLFYASVKLLVMPVYNFPLSCRRMYTHHTLLVYRVVAMIIQCVLSCL 138
L R+LF V + +P++ LSC + HHTL YR A++ V+ L
Sbjct: 166 LCCRLLFAFGV-VFELPIFMIFLSCLGVIDHHTLRRYRKYALLCGFVVGAL 215
>UniRef50_A7GSR3 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Putative uncharacterized protein - Bacillus cereus
subsp. cytotoxis NVH 391-98
Length = 138
Score = 31.5 bits (68), Expect = 5.4
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +3
Query: 135 GQTRKDALYNHGDDSVHQQGVVRVHSAAGQWKIVHGHHEQLNRRIKQHSNKQGAKCFRNA 314
G K +YN+ D++++++ +++ G K + ++ + + K+G K FRNA
Sbjct: 58 GNIPKGVIYNNKDNAIYEEFGTGIYAEKGGRKTPWVYKDKRTGKFYRTRGKKGTKAFRNA 117
>UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 105
Score = 31.5 bits (68), Expect = 5.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 204 VHSAAGQWKIVHGHHEQLNRRIKQHSNKQGAKCFRNATNLRLVY 335
+ + G W G + RR KQH + +GAK R T L+LV+
Sbjct: 9 IETPIGHWYT--GITTDVERRFKQHQSGKGAKNLRGKTPLKLVF 50
>UniRef50_O75382-3 Cluster: Isoform Gamma of O75382 ; n=9;
Euteleostomi|Rep: Isoform Gamma of O75382 - Homo sapiens
(Human)
Length = 665
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 137 PNTKGRTV*SWRRLCTPTRCGACTFCGRTMENCTRASRAT*QTHKTAFEQTRRQVFSQRN 316
PN +G+T+ + C CG C G E+ T R + HK A ++ V +
Sbjct: 116 PNHEGKTMEFYCEACETAMCGECR-AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP 174
Query: 317 QFTARVS 337
Q +A ++
Sbjct: 175 QLSAAIA 181
>UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum
granulovirus|Rep: ORF75 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 97
Score = 31.1 bits (67), Expect = 7.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 255 LNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTT 356
++RR + H + +GAK RN L+LVY S R T
Sbjct: 28 VDRRFRLHCSGRGAKFLRNKQPLQLVYRSKCRFT 61
>UniRef50_Q8IYN4 Cluster: Hexosaminidase domain-containing protein;
n=18; Theria|Rep: Hexosaminidase domain-containing
protein - Homo sapiens (Human)
Length = 493
Score = 31.1 bits (67), Expect = 7.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 167 WRRLCTPTRCGACTFCGRTMENC 235
WR+ CTP C C C RT C
Sbjct: 385 WRKTCTPA-CSGCKLCCRTSARC 406
>UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular
organisms|Rep: UPF0213 protein DP2720 - Desulfotalea
psychrophila
Length = 110
Score = 31.1 bits (67), Expect = 7.1
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 196 WCVYILRQDNGKLYTGITSNL 258
W VYI++ +G LYTGIT+N+
Sbjct: 14 WFVYIVQCADGTLYTGITTNI 34
>UniRef50_O75382 Cluster: Tripartite motif-containing protein 3;
n=48; Deuterostomia|Rep: Tripartite motif-containing
protein 3 - Homo sapiens (Human)
Length = 744
Score = 31.1 bits (67), Expect = 7.1
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 137 PNTKGRTV*SWRRLCTPTRCGACTFCGRTMENCTRASRAT*QTHKTAFEQTRRQVFSQRN 316
PN +G+T+ + C CG C G E+ T R + HK A ++ V +
Sbjct: 116 PNHEGKTMEFYCEACETAMCGECR-AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP 174
Query: 317 QFTARVS 337
Q +A ++
Sbjct: 175 QLSAAIA 181
>UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_00865;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_00865 - Methylophilales
bacterium HTCC2181
Length = 102
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 196 WCVYILRQDNGKLYTGITSNLT 261
W VYIL+ + LYTGIT+N++
Sbjct: 25 WFVYILKCSDDTLYTGITNNVS 46
>UniRef50_UPI00006A1F54 Cluster: UPI00006A1F54 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A1F54 UniRef100 entry -
Xenopus tropicalis
Length = 866
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
HH ++ K +Q KCFR+A NL++ H+ T KP
Sbjct: 20 HHHSIHTGEKPFVCQQCGKCFRDANNLKV--HTRSHTKEKP 58
>UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Desulfuromonas acetoxidans DSM 684
Length = 86
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 255 LNRRIKQHSNKQGAKCFRNATNLRLVYHSA 344
L RR QH++ +GA+ FR + +VYH +
Sbjct: 26 LERRFAQHASGRGARYFRGHEPIEVVYHES 55
>UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain
protein; n=12; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-7)
Length = 141
Score = 30.7 bits (66), Expect = 9.4
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 196 WCVYILRQDNGKLYTGITSNL 258
W +Y++R NG LYTGIT+++
Sbjct: 57 WYLYLIRCANGHLYTGITTDV 77
>UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-4)
Length = 139
Score = 30.7 bits (66), Expect = 9.4
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 196 WCVYILRQDNGKLYTGITSNL 258
W +Y++R NG LYTGIT+++
Sbjct: 57 WYLYLIRCANGHLYTGITTDV 77
>UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Rhizobiales|Rep: Excinuclease ABC, C
subunit domain protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 95
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 199 CVYIL-RQDNGKLYTGITSNL 258
CVYI+ + NG LYTG+TSN+
Sbjct: 5 CVYIVANRRNGTLYTGVTSNM 25
>UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Parvibaculum lavamentivorans DS-1|Rep: Excinuclease
ABC C subunit domain protein - Parvibaculum
lavamentivorans DS-1
Length = 96
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 190 KVWCVYILRQDNGKLYTGIT 249
K W VYIL G+LYTGIT
Sbjct: 7 KPWYVYILECTGGRLYTGIT 26
>UniRef50_A0FYB0 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phymatum STM815|Rep: Putative
uncharacterized protein - Burkholderia phymatum STM815
Length = 82
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 331 TSRKLVALRKHLAPCLFECCFMRLLSCS*CPCTIFHCPAAEC 206
++ +LVAL + L CC LL C I HCP C
Sbjct: 36 SNAQLVALLLCCSAALLLCCSAALLLCCSAALQIIHCPQQAC 77
>UniRef50_A0DH71 Cluster: Chromosome undetermined scaffold_50, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_50,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 786
Score = 30.7 bits (66), Expect = 9.4
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 129 SLGQTRKDALYNHGDDSVHQQGVVRV-HSAAGQWKIVHGHHEQLNRRIKQHSNKQGAKCF 305
S G + D LY G + ++ + RV HS + H HH Q N + H N+ K
Sbjct: 204 SKGYKKYDLLYCEGKEQREREKMNRVDHSQKNKHN--HQHHHQHNHDHRHHENQYRQKHQ 261
Query: 306 RNATNLRLVYHSARRTTTK 362
+N + + H ++T K
Sbjct: 262 KNEYSQNMP-HKTKKTIQK 279
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,516,169
Number of Sequences: 1657284
Number of extensions: 6462222
Number of successful extensions: 19954
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 19218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19921
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -