Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120131X.Seq
(378 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 24 0.58
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 0.77
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 2.3
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 2.3
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 5.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 20 7.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 7.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 7.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 7.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 7.2
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 20 7.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 20 9.5
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 20 9.5
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 9.5
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 23.8 bits (49), Expect = 0.58
Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 224 LSCRRMY-THHTLLVYRVVAMIIQCVLSCL 138
L+C M TH T+ ++++ ++ C ++CL
Sbjct: 195 LACGVMVVTHITMAHFKIIQVVPYCYINCL 224
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.4 bits (48), Expect = 0.77
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 238 CTIFHCPAAECTRTTPCW 185
C++ P A CT +T CW
Sbjct: 518 CSLGINPWANCTASTRCW 535
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 2.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 213 QNVHAPHLVGVQSRRHDY 160
+N H PH + +SRR Y
Sbjct: 600 RNFHGPHRLAARSRRCCY 617
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 2.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 213 QNVHAPHLVGVQSRRHDY 160
+N H PH + +SRR Y
Sbjct: 492 RNFHGPHRLAARSRRCCY 509
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +3
Query: 198 VRVHSAAGQWKIVHGHHEQL 257
V + G W V GHH L
Sbjct: 204 VMAYDLRGSWDGVTGHHSGL 223
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.2 bits (40), Expect = 7.2
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 162 NHGDDSVHQQGVVRVHSAAGQWKIVHGHHEQLNRRIKQHSN 284
++G DSV Q +V A Q + L ++K H +
Sbjct: 1381 DYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLTFKLKPHES 1421
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 270 LCVC*VARDARVQFSIVLPQNVHAP 196
LC + R RV++S HAP
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTHAP 867
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 270 LCVC*VARDARVQFSIVLPQNVHAP 196
LC + R RV++S HAP
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTHAP 867
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 270 LCVC*VARDARVQFSIVLPQNVHAP 196
LC + R RV++S HAP
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTHAP 867
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 270 LCVC*VARDARVQFSIVLPQNVHAP 196
LC + R RV++S HAP
Sbjct: 843 LCTLLLQRGYRVEYSAASDAYTHAP 867
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 165 DYTVRPFVFGRVT 127
D+T+ F+FG VT
Sbjct: 364 DFTLLGFIFGSVT 376
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 7 RLPG*LDRIGVPKRNSKTFYFSTN 78
R+PG L+ VP+ + TF + N
Sbjct: 173 RIPGQLEPANVPQMITLTFNGAVN 196
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 7 RLPG*LDRIGVPKRNSKTFYFSTN 78
R+PG L+ VP+ + TF + N
Sbjct: 180 RIPGQLEPANVPQMITLTFNGAVN 203
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 292 APSVFATQPIYGSCITARGVRLQN 363
AP+ TQ +Y SC QN
Sbjct: 123 APNGHQTQVVYASCKLQAAAVTQN 146
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,270
Number of Sequences: 336
Number of extensions: 1611
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7803226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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