Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120131X.Seq
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096827-1|AAH96827.1| 744|Homo sapiens tripartite motif-contai... 31 1.2
BC035561-1|AAH35561.1| 493|Homo sapiens hexosaminidase (glycosy... 31 1.2
AF220022-1|AAG53476.1| 665|Homo sapiens tripartite motif protei... 31 1.2
AF220020-1|AAG53474.1| 744|Homo sapiens tripartite motif protei... 31 1.2
AF045239-1|AAC24809.1| 744|Homo sapiens brain expressed ring fi... 31 1.2
BC033849-1|AAH33849.2| 616|Homo sapiens zinc finger protein 567... 29 3.8
AK027542-1|BAB55187.1| 363|Homo sapiens protein ( Homo sapiens ... 29 5.0
BC036788-1|AAH36788.2| 494|Homo sapiens integrin, beta-like 1 (... 29 6.6
AL355807-1|CAI14550.1| 494|Homo sapiens integrin, beta-like 1 (... 29 6.6
AL160153-1|CAH73400.1| 494|Homo sapiens integrin, beta-like 1 (... 29 6.6
AL139800-1|CAH71455.1| 494|Homo sapiens integrin, beta-like 1 (... 29 6.6
AK128700-1|BAC87578.1| 615|Homo sapiens protein ( Homo sapiens ... 29 6.6
AK128282-1|BAC87366.1| 512|Homo sapiens protein ( Homo sapiens ... 29 6.6
AF072752-1|AAD17666.1| 494|Homo sapiens ten integrin EGF-like r... 29 6.6
AE014302-1|AAN16024.1| 494|Homo sapiens ITGBL1 protein. 29 6.6
BC035760-1|AAH35760.1| 595|Homo sapiens ZNF440 protein protein. 28 8.8
AK095252-1|BAC04510.1| 595|Homo sapiens protein ( Homo sapiens ... 28 8.8
>BC096827-1|AAH96827.1| 744|Homo sapiens tripartite
motif-containing 3 protein.
Length = 744
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 137 PNTKGRTV*SWRRLCTPTRCGACTFCGRTMENCTRASRAT*QTHKTAFEQTRRQVFSQRN 316
PN +G+T+ + C CG C G E+ T R + HK A ++ V +
Sbjct: 116 PNHEGKTMEFYCEACETAMCGECR-AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP 174
Query: 317 QFTARVS 337
Q +A ++
Sbjct: 175 QLSAAIA 181
>BC035561-1|AAH35561.1| 493|Homo sapiens hexosaminidase (glycosyl
hydrolase family 20, catalytic domain) containing
protein.
Length = 493
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 167 WRRLCTPTRCGACTFCGRTMENC 235
WR+ CTP C C C RT C
Sbjct: 385 WRKTCTPA-CSGCKLCCRTSARC 406
>AF220022-1|AAG53476.1| 665|Homo sapiens tripartite motif protein
TRIM3 isoform gamma protein.
Length = 665
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 137 PNTKGRTV*SWRRLCTPTRCGACTFCGRTMENCTRASRAT*QTHKTAFEQTRRQVFSQRN 316
PN +G+T+ + C CG C G E+ T R + HK A ++ V +
Sbjct: 116 PNHEGKTMEFYCEACETAMCGECR-AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP 174
Query: 317 QFTARVS 337
Q +A ++
Sbjct: 175 QLSAAIA 181
>AF220020-1|AAG53474.1| 744|Homo sapiens tripartite motif protein
TRIM3 isoform alpha protein.
Length = 744
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 137 PNTKGRTV*SWRRLCTPTRCGACTFCGRTMENCTRASRAT*QTHKTAFEQTRRQVFSQRN 316
PN +G+T+ + C CG C G E+ T R + HK A ++ V +
Sbjct: 116 PNHEGKTMEFYCEACETAMCGECR-AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP 174
Query: 317 QFTARVS 337
Q +A ++
Sbjct: 175 QLSAAIA 181
>AF045239-1|AAC24809.1| 744|Homo sapiens brain expressed ring
finger protein protein.
Length = 744
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 137 PNTKGRTV*SWRRLCTPTRCGACTFCGRTMENCTRASRAT*QTHKTAFEQTRRQVFSQRN 316
PN +G+T+ + C CG C G E+ T R + HK A ++ V +
Sbjct: 116 PNHEGKTMEFYCEACETAMCGECR-AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLP 174
Query: 317 QFTARVS 337
Q +A ++
Sbjct: 175 QLSAAIA 181
>BC033849-1|AAH33849.2| 616|Homo sapiens zinc finger protein 567
protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
HH++ + K + + KCFR TN L+ H T KP
Sbjct: 547 HHQRTHTGEKPYKCSECGKCFRQKTN--LIVHQRTHTGEKP 585
>AK027542-1|BAB55187.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ14636 fis, clone NT2RP2001233, weakly similar to
ZINC FINGER PROTEIN 91. ).
Length = 363
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
+HE+ + K + KQ K FR+A NL+L H T KP
Sbjct: 263 YHERTHTGEKPYECKQCGKAFRSAPNLQL--HGRTHTGEKP 301
>BC036788-1|AAH36788.2| 494|Homo sapiens integrin, beta-like 1
(with EGF-like repeat domains) protein.
Length = 494
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 351 YASRCD-TRAVNWLRCENTWRLVCSNAVLCVC 259
Y + CD T+ + C+N+ ++CSNA C C
Sbjct: 128 YPTNCDLTKKKSNQMCKNSQDIICSNAGTCHC 159
>AL355807-1|CAI14550.1| 494|Homo sapiens integrin, beta-like 1
(with EGF-like repeat domains) protein.
Length = 494
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 351 YASRCD-TRAVNWLRCENTWRLVCSNAVLCVC 259
Y + CD T+ + C+N+ ++CSNA C C
Sbjct: 128 YPTNCDLTKKKSNQMCKNSQDIICSNAGTCHC 159
>AL160153-1|CAH73400.1| 494|Homo sapiens integrin, beta-like 1
(with EGF-like repeat domains) protein.
Length = 494
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 351 YASRCD-TRAVNWLRCENTWRLVCSNAVLCVC 259
Y + CD T+ + C+N+ ++CSNA C C
Sbjct: 128 YPTNCDLTKKKSNQMCKNSQDIICSNAGTCHC 159
>AL139800-1|CAH71455.1| 494|Homo sapiens integrin, beta-like 1
(with EGF-like repeat domains) protein.
Length = 494
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 351 YASRCD-TRAVNWLRCENTWRLVCSNAVLCVC 259
Y + CD T+ + C+N+ ++CSNA C C
Sbjct: 128 YPTNCDLTKKKSNQMCKNSQDIICSNAGTCHC 159
>AK128700-1|BAC87578.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ46867 fis, clone UTERU3012293, weakly similar
to Homo sapiens zinc finger protein 14 (KOX 6) (ZNF14).
).
Length = 615
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
+HE + K H KQ K FR A++LR+ H T KP
Sbjct: 185 YHEMTHTGEKPHECKQCGKTFRCASSLRI--HGRTHTGEKP 223
>AK128282-1|BAC87366.1| 512|Homo sapiens protein ( Homo sapiens
cDNA FLJ46419 fis, clone THYMU3012983, moderately
similar to Homo sapiens zinc finger protein 14 (KOX 6)
(ZNF14). ).
Length = 512
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
+HE + K H KQ K FR A++LR+ H T KP
Sbjct: 82 YHEMTHTGEKPHECKQCGKTFRCASSLRI--HGRTHTGEKP 120
>AF072752-1|AAD17666.1| 494|Homo sapiens ten integrin EGF-like
repeat domains protein precursor protein.
Length = 494
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 351 YASRCD-TRAVNWLRCENTWRLVCSNAVLCVC 259
Y + CD T+ + C+N+ ++CSNA C C
Sbjct: 128 YPTNCDLTKKKSNQMCKNSQDIICSNAGTCHC 159
>AE014302-1|AAN16024.1| 494|Homo sapiens ITGBL1 protein.
Length = 494
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 351 YASRCD-TRAVNWLRCENTWRLVCSNAVLCVC 259
Y + CD T+ + C+N+ ++CSNA C C
Sbjct: 128 YPTNCDLTKKKSNQMCKNSQDIICSNAGTCHC 159
>BC035760-1|AAH35760.1| 595|Homo sapiens ZNF440 protein protein.
Length = 595
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
+HE+ + K + KQ K FR+A++LR+ H T KP
Sbjct: 385 YHERTHTGEKPYECKQCGKAFRSASHLRV--HGRTHTGEKP 423
>AK095252-1|BAC04510.1| 595|Homo sapiens protein ( Homo sapiens
cDNA FLJ37933 fis, clone CTONG2005028, moderately
similar to ZINC FINGER PROTEIN ZFP-36. ).
Length = 595
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 243 HHEQLNRRIKQHSNKQGAKCFRNATNLRLVYHSARRTTTKP 365
+HE+ + K + KQ K FR+A++LR+ H T KP
Sbjct: 385 YHERTHTGEKPYECKQCGKAFRSASHLRV--HGRTHTGEKP 423
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,223,422
Number of Sequences: 237096
Number of extensions: 993073
Number of successful extensions: 2549
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2549
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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