Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120130.Seq
(759 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 123 6e-27
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 121 2e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 118 2e-25
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 117 3e-25
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 116 5e-25
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 116 6e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 116 8e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 113 3e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 107 4e-22
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 106 5e-22
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 105 9e-22
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 105 2e-21
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 104 2e-21
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 103 4e-21
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 102 8e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 100 3e-20
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 99 6e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 97 3e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 97 3e-19
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 93 7e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 93 7e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 91 4e-17
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 90 5e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 90 5e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 89 1e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 88 2e-16
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 87 6e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 81 2e-14
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 81 3e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 80 7e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 79 1e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 78 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 3e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 8e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 76 8e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 76 1e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 76 1e-12
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 75 1e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 75 3e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 4e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 73 6e-12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 72 1e-11
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 72 1e-11
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 72 2e-11
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 71 3e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 71 4e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 70 5e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 70 7e-11
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 70 7e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 69 1e-10
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 69 2e-10
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 68 3e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 67 4e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 67 4e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 7e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 66 9e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 66 1e-09
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 65 2e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 65 2e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 64 4e-09
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 64 5e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 63 6e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 63 8e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 63 8e-09
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 62 1e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 62 1e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 61 3e-08
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 61 3e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 3e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 61 3e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 60 4e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 60 4e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 60 4e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 6e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 60 8e-08
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 59 1e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 59 1e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 58 2e-07
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 58 2e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 58 2e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 57 5e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 56 7e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 9e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 56 1e-06
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 52 2e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 52 2e-05
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 50 5e-05
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 50 6e-05
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 50 8e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 49 1e-04
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 49 1e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 48 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 47 4e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 45 0.002
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 36 0.82
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.5
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.3
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 4.4
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 5.8
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 5.8
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 123 bits (296), Expect = 6e-27
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILY HLF FFGHPEVYIL
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 692 ILPGFGIISHIISQERGKKK 751
ILPGFGIISH+I E GKK+
Sbjct: 231 ILPGFGIISHMIFNESGKKE 250
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 253 IDF 261
+ F
Sbjct: 84 MSF 86
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 121 bits (291), Expect = 2e-26
Identities = 57/78 (73%), Positives = 62/78 (79%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 249
Query: 692 ILPGFGIISHIISQERGK 745
ILPGFGIISHI+S GK
Sbjct: 250 ILPGFGIISHIVSTFSGK 267
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 180 TMHRLPLFV 188
Score = 63.3 bits (147), Expect = 6e-09
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N VP+++GAPD+AFPR+NNI F PP L
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 118 bits (284), Expect = 2e-25
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 692 ILPGFGIISHIISQERGKKK 751
ILPGFGIISH+++ GKK+
Sbjct: 247 ILPGFGIISHVVAYYAGKKE 266
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/92 (44%), Positives = 48/92 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N LVPL++GAPD+AFPR+NN+ F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 178 QYQTPLFV 185
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 117 bits (282), Expect = 3e-25
Identities = 53/78 (67%), Positives = 61/78 (78%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 692 ILPGFGIISHIISQERGK 745
I+PGFG++SHI+S GK
Sbjct: 247 IIPGFGMVSHIVSAFSGK 264
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 486 FDQLPLFV 509
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 116 bits (280), Expect = 5e-25
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 692 ILPGFGIISHIISQERGKKK 751
ILPGFG+ISHI++ GKK+
Sbjct: 247 ILPGFGMISHIVTYYSGKKE 266
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/94 (43%), Positives = 49/94 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVPL++GAPD+AFPR+NN+ F PP L
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/69 (50%), Positives = 40/69 (57%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 483 SFDQLPLFV 509
+ Q PLFV
Sbjct: 177 TQYQTPLFV 185
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 116 bits (279), Expect = 6e-25
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 692 ILPGFGIISHIISQERGKKK 751
ILPGFG+ISH+++ GKK+
Sbjct: 248 ILPGFGMISHVVTYYAGKKE 267
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/92 (45%), Positives = 49/92 (53%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N LVPL++GAPD+AFPR+NN+ F PP
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/68 (57%), Positives = 41/68 (60%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 179 QYQTPLFV 186
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 116 bits (278), Expect = 8e-25
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V +TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 692 ILPGFGIISHIISQERGKKK 751
ILPGFG+ISH+++ GKK+
Sbjct: 247 ILPGFGMISHVVTYYAGKKE 266
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/92 (44%), Positives = 48/92 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N LVPL++GAPD+AFPR+NN+ F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 178 QYQTPLFV 185
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 113 bits (273), Expect = 3e-24
Identities = 52/70 (74%), Positives = 57/70 (81%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILP 700
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILY HLF FFGHPEVYILILP
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILP 257
Query: 701 GFGIISHIIS 730
GFG+ISHI+S
Sbjct: 258 GFGMISHIVS 267
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++G+PD+AFPR+NNI F PP L
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 483 SFDQLPLFV 509
S ++PLFV
Sbjct: 185 SMYRIPLFV 193
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 107 bits (256), Expect = 4e-22
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+ H+F FFGHPEVYI+
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIV 352
Query: 692 ILPGFGIISHIIS 730
ILP FG+ISHI++
Sbjct: 353 ILPAFGVISHIVA 365
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 70 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 243
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 244 INNIDFDSY 270
+NN+ + Y
Sbjct: 203 LNNLSYWMY 211
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 106 bits (255), Expect = 5e-22
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V +T+F A AIT+LL DRN NTSF+DP GGGD +LY HLF FFGHPEVYIL
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYIL 250
Query: 692 ILPGFGIISHIIS 730
ILPGFG++SHII+
Sbjct: 251 ILPGFGLVSHIIA 263
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +3
Query: 309 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 247 NNIDF 261
NN F
Sbjct: 102 NNFSF 106
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 105 bits (253), Expect = 9e-22
Identities = 52/78 (66%), Positives = 56/78 (71%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
AV ITA AG IT++LTDRN NTSFF+ AGGGDPILY HLF FFGHPEVYIL
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 692 ILPGFGIISHIISQERGK 745
I+PGFGIIS IS K
Sbjct: 248 IIPGFGIISTTISANSNK 265
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 73 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 250 NIDF 261
NI +
Sbjct: 100 NISY 103
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 105 bits (251), Expect = 2e-21
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY HLF FFGHPEVYIL
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYIL 247
Query: 692 ILPGFGIISHIIS 730
I+PGFGIISH++S
Sbjct: 248 IIPGFGIISHVVS 260
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/69 (52%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 178 TMHKLPLFV 186
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 247 NNIDF 261
NNI F
Sbjct: 99 NNIAF 103
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 104 bits (250), Expect = 2e-21
Identities = 52/78 (66%), Positives = 57/78 (73%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILY HLF FFGHPEVYIL
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYIL 273
Query: 692 ILPGFGIISHIISQERGK 745
I+PGFGIIS +IS K
Sbjct: 274 IIPGFGIISTVISANSNK 291
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 73 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 250 NIDFDSYPPPLY 285
N+ + P L+
Sbjct: 126 NVSYWLLIPSLF 137
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 103 bits (248), Expect = 4e-21
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI Y H F FFGHPEVYIL
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYIL 247
Query: 692 ILPGFGIISHIIS 730
I+PGFGI+SHI+S
Sbjct: 248 IIPGFGIVSHIVS 260
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/69 (53%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
S ++PLFV
Sbjct: 178 SMHKMPLFV 186
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 247 NNIDF 261
N+I F
Sbjct: 99 NSIGF 103
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 102 bits (245), Expect = 8e-21
Identities = 48/73 (65%), Positives = 55/73 (75%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V +TAF A AIT+LLTDRN T+F+D AGGGDP LY HLF FFGHPEVYI+
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIM 289
Query: 692 ILPGFGIISHIIS 730
ILPGFGIIS I+S
Sbjct: 290 ILPGFGIISQIVS 302
Score = 49.6 bits (113), Expect = 8e-05
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +3
Query: 312 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 491
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 492 QLPLFV 509
++PLFV
Sbjct: 223 KMPLFV 228
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 112 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 100 bits (240), Expect = 3e-20
Identities = 48/61 (78%), Positives = 49/61 (80%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLF FFGHPEVYIL
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYIL 219
Query: 692 I 694
I
Sbjct: 220 I 220
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/69 (65%), Positives = 47/69 (68%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 483 SFDQLPLFV 509
SFDQ+PLF+
Sbjct: 150 SFDQMPLFI 158
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 253 IDFDSYPPPL 282
+ F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 99 bits (238), Expect = 6e-20
Identities = 54/93 (58%), Positives = 61/93 (65%)
Frame = -2
Query: 281 KGGG*ESKSILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 102
K GG +LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 101 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 3
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 73.7 bits (173), Expect = 4e-12
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = -3
Query: 508 TNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVH 329
TN G S I +R I+E PAKC+EKI STD P CAI SGG TVH
Sbjct: 50 TNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVH 109
Query: 328 PVPAPFSTILLEINNIREGGRSQN 257
PVP P STI L + ++EGG +QN
Sbjct: 110 PVPTPLSTIPLNKSKVKEGGSNQN 133
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = -1
Query: 657 NKCGYKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAQ 508
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T Q
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQ 49
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 97.5 bits (232), Expect = 3e-19
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHI 724
A IT+LL DRN T+FF+P+GGGDPIL+ HLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 97.5 bits (232), Expect = 3e-19
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = +2
Query: 569 ITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
IT++LTDRN NTSFF+ AGGGDPIL+ HLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 177
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 178 XXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N L+PL++G PD+AFPR+NNI F PP L
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
Frame = +3
Query: 303 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 93.1 bits (221), Expect = 7e-18
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQER 739
A +T+LL DR+ +TSF+ P GGGDPIL+ HLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 740 GK 745
K
Sbjct: 266 AK 267
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 37.1 bits (82), Expect = 0.47
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
Query: 253 I 255
+
Sbjct: 102 L 102
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 93.1 bits (221), Expect = 7e-18
Identities = 47/82 (57%), Positives = 53/82 (64%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLF FFGHP++
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFS 243
Query: 692 ILPGFGIISHIISQERGKKKLL 757
+ ++ K KLL
Sbjct: 244 FSQDLVSFHMLFPKKVEKSKLL 265
Score = 87.8 bits (208), Expect = 3e-16
Identities = 46/69 (66%), Positives = 47/69 (68%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 483 SFDQLPLFV 509
SFDQ+PLFV
Sbjct: 174 SFDQMPLFV 182
Score = 87.0 bits (206), Expect = 4e-16
Identities = 47/94 (50%), Positives = 51/94 (54%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVPL+LGAPD+AFPR+NN+ F PP L
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 90.6 bits (215), Expect = 4e-17
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +2
Query: 563 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
G + +LL+D + NT FFDP GDPILY HLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 36.7 bits (81), Expect = 0.62
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 425
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 112 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 255
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 90.2 bits (214), Expect = 5e-17
Identities = 44/81 (54%), Positives = 55/81 (67%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 692 ILPGFGIISHIISQERGKKKL 754
I+P FG++S I+ Q KK +
Sbjct: 265 IVPVFGVVSQIV-QVYAKKPI 284
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 90.2 bits (214), Expect = 5e-17
Identities = 44/81 (54%), Positives = 55/81 (67%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 692 ILPGFGIISHIISQERGKKKL 754
I+P FG++S I+ Q KK +
Sbjct: 265 IVPVFGVVSQIV-QVYAKKPI 284
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +2
Query: 593 NLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 751
N T+FFDPAGGGD IL+ HLF FFGHPEVYILILPGFG+ISH+I+ GK++
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILP 700
ITA AG +T++L DRN NTSF+D GGGD IL+ H+F FFGHPEVYI++LP
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLP 252
Query: 701 GFGIISHII 727
FG+IS I+
Sbjct: 253 VFGLISTIV 261
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 88 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDFDS 267
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 268 Y 270
Y
Sbjct: 108 Y 108
Score = 36.7 bits (81), Expect = 0.62
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 86.6 bits (205), Expect = 6e-16
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILP 700
+T+F AG++ LL DRN NTSF+D GG+P+LY HLF FFGHPEVY++ILP
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILP 259
Query: 701 GFGIISHII 727
FGIIS +
Sbjct: 260 VFGIISEAV 268
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 247 NNIDF 261
N + F
Sbjct: 109 NALSF 113
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
++ +T+F ++ DR+ NT FF+ + GDP+LY HLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 692 ILPGFGIISHIIS 730
ILPGFGIIS ++S
Sbjct: 253 ILPGFGIISLLLS 265
Score = 40.7 bits (91), Expect = 0.038
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 81.0 bits (191), Expect = 3e-14
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +1
Query: 592 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 747
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKK 58
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 79.8 bits (188), Expect = 7e-14
Identities = 38/54 (70%), Positives = 40/54 (74%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGH 673
AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILY HLF F GH
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 486 FDQLPLFV 509
++PLFV
Sbjct: 97 PXRMPLFV 104
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 79.0 bits (186), Expect = 1e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A IT++LTD++L T F+D GGDP+LY HLF FFGHPEVY++ILP FG+ S I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 318 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.9 bits (74), Expect = 4.4
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 253 IDF 261
+ F
Sbjct: 95 LSF 97
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/92 (43%), Positives = 48/92 (52%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 180
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 181 XXXXN*LVPLILGAPDIAFPRINNIDFDSYPP 276
N L+PL++GAPD+AFPR+NN+ F PP
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 486 FDQLPLFV 509
Q PLFV
Sbjct: 167 QYQTPLFV 174
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 619
AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 253 IDFDSYPPPL 282
+ F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF 658
+V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILY HLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 253 IDFDSYPPPLY 285
I F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFG 670
+V ITA AGAIT+LLTDR NT+FFDPAGGGDPILY HLF FFG
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 483 SFDQLPLFV 509
+ ++PLFV
Sbjct: 178 TMSRIPLFV 186
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 76.2 bits (179), Expect = 8e-13
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
A+ +LL DRN T+FF AGG DPI + HLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 746 K 748
K
Sbjct: 319 K 319
Score = 36.7 bits (81), Expect = 0.62
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 253 IDFDSYPP 276
I F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A+ +LL DR L ++FFDP GG +L+ H F FGHPEVYILILPGFG+IS +I
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 253 IDF 261
F
Sbjct: 119 FGF 121
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/72 (48%), Positives = 44/72 (61%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 253 IDFDSYPPPLYY 288
+ F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 7.7
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 372 GRSVDLAIFSLHLAGISS 425
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A A+ +L D TSFF+P GGGDP++Y HLF F+ HP VYI+ILP FG+IS +I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 253 IDFDSYPP 276
+ F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 250 NIDFDSYPP 276
N+ F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
AI +LL DRN TSFF AG G IL+ HLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 746 K 748
+
Sbjct: 350 R 350
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 253 IDFDSYPP 276
I F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
AGA+T+L D+ L T+FF+PA GGDP++Y ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 41.5 bits (93), Expect = 0.022
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 85 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSW 60
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILP 700
+T+F A T L+ DR + T FF+PA GGD +L+ HLF FFGHPEVYI+ LP
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLP 265
Query: 701 GFGIISHIIS 730
G++S I++
Sbjct: 266 AVGMVSSIVA 275
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
AIT LL DRN+N++ +D G DP+LY HLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 33.5 bits (73), Expect = 5.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 112 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 324 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 425
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
A+ ++ DR+ T+FF+ A GGDPIL HLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 746 K 748
+
Sbjct: 426 R 426
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 247 NNIDF 261
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 70.9 bits (166), Expect = 3e-11
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = +2
Query: 563 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHI 724
G +LL D + TSFF P GGGDP+L+ H F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 253 IDF 261
F
Sbjct: 123 AAF 125
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF 658
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 486 FDQLPLFV 509
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFF-----DPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHI 724
AGAI +LL +R+L FF DPA GDP L+ H+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 725 ISQ 733
I +
Sbjct: 268 IQR 270
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 69.7 bits (163), Expect = 7e-11
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 563 GAITILLTDRNL-NTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
G + +L+T NL FDPA GGDP+L+ HLF F+ HP VYI++LP FG++S +++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 253 IDFDSY 270
+ Y
Sbjct: 130 LSLYIY 135
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = +2
Query: 578 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
LL DR+ T FF P GGD +L+ HLF FFGHPEVYILILP GIIS ++
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +2
Query: 569 ITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
+ +++ DR T+FF+P GG+ +++ HLF FGHPEVYILILP FGI S +I
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/67 (53%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Frame = +2
Query: 575 ILLTDRNLNTSFFDPA----------GGGDPILYPHLF*FFGHPEVYILILPGFGIISHI 724
+LL DR L TSFF P GGG P+L+ HLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 725 ISQERGK 745
IS K
Sbjct: 298 ISTHARK 304
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYPHLF*FFGHPEVY 685
+TA A +LL DR+ T FF GGGDPIL+ HLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 686 ILILPGFGIISHIIS 730
I+ILP +GI+ ++S
Sbjct: 283 IMILPAWGILGDVLS 297
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 115 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/62 (51%), Positives = 40/62 (64%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY HLF FFG I+
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATII 247
Query: 692 IL 697
+L
Sbjct: 248 ML 249
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/69 (52%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 178 TMHKLPLFV 186
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 247 NNIDF 261
NNI F
Sbjct: 99 NNIAF 103
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 575 ILLTDRNLNTSFF-DPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 66.1 bits (154), Expect = 9e-10
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 306 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 485
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 486 FDQLPLFV 509
+LPLFV
Sbjct: 178 LHKLPLFV 185
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 563 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERG 742
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 743 KK 748
K+
Sbjct: 309 KR 310
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A+ +L+ DR +FF+ GG + Y HLF FGHPEVYILILP GIIS +I
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 253 IDFDSY 270
+ Y
Sbjct: 116 FSYWIY 121
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +2
Query: 578 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
+L DR L +DPA GG +L+ HLF FFGHPEVY+L LP FGI+S II
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
Score = 37.1 bits (82), Expect = 0.47
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 250 NIDF 261
F
Sbjct: 124 AFGF 127
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N LVP+++GAPD+AFPR+NNI F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/69 (49%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 178 TMHKLPLFV 186
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFG 670
A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY HLF FFG
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 247 NNIDF 261
NNI F
Sbjct: 99 NNIGF 103
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
AG + L +R T FFD A GG P+L+ LF FFGHPEVYILILP G++S ++
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL 256
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 63.3 bits (147), Expect = 6e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 746 K 748
+
Sbjct: 309 R 309
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 62.9 bits (146), Expect = 8e-09
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A +L +R+ FF GGDP+L+ HLF FFGHPEVYI+ LP G++S I+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 62.9 bits (146), Expect = 8e-09
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIIS 718
A +L DRN T FFD A GG P+L+ HLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 174
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 175 XXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPL 282
N VP+++G+PD+AFPR+NNI F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 11/65 (16%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAG-----------GGDPILYPHLF*FFGHPEVYILILPGFGI 712
A +L DR TSFF P+G GG +L+ HLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 713 ISHII 727
+SHI+
Sbjct: 302 VSHIL 306
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
AV TA A +T+ + DRN NTSFF+ AGGGD +LY HLF ++ HPEV I+
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKII 252
Query: 692 IL 697
L
Sbjct: 253 CL 254
Score = 56.4 bits (130), Expect = 7e-07
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 483 SFDQLPLF 506
++ +PLF
Sbjct: 183 KYENVPLF 190
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 247 NNIDFDSYPPPL 282
NNI F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A +L DR FF A GDPIL+ HLF FFGHPEVYI+ +P G++S II
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGH--PEVY 685
+V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F FFG P +
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIII 264
Query: 686 ILIL 697
I+I+
Sbjct: 265 IIII 268
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
Score = 37.9 bits (84), Expect = 0.27
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 250 NIDF 261
N+ F
Sbjct: 139 NLSF 142
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A +L +R + FF GGDP+L+ HLF FFGHPEVYI+ LP G++S I+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 575 ILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
+L +R L FFD GGDP+L+ HLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 60.5 bits (140), Expect = 4e-08
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
A ++L +R + S+F+PA GGDP+L+ F F+ HP VY+++LP GI++ + S
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
Score = 36.3 bits (80), Expect = 0.82
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 253 IDF 261
+
Sbjct: 112 FSY 114
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 59.7 bits (138), Expect = 8e-08
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
++ ++ + FDPA GGDP+L+ H F F+ HP VYI++LP +IS ++
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 252
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 253 IDFDSY 270
+ F Y
Sbjct: 123 LSFYVY 128
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Frame = +2
Query: 521 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYPHLF*FFG 670
ITA A +L+ DR+L TSFF AG GG P+L+ HLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 671 HPEVYILILPGFGIISHIISQERGK 745
HPEVYI+++P GI S +I+ K
Sbjct: 302 HPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 482
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 483 SFDQLPLFV 509
+ +LPLFV
Sbjct: 195 DYSKLPLFV 203
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/67 (47%), Positives = 40/67 (59%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
+V ITA A +T+LL DRN NTSFF +GGGDP+LY H+ F+ +P V IL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLIL 261
Query: 692 ILPGFGI 712
I GI
Sbjct: 262 IWLTSGI 268
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 82 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 262 DSYPPPLYY 288
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +2
Query: 578 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 587 DRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
+R + FFDP GGDP+L+ HLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +2
Query: 566 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
A+T+L D+ + T FFD A GGD + Y +LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 249
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYPHLF 658
A+ ITA A ++L DR + T FF P AGGG P+L+ HLF
Sbjct: 225 AMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLF 284
Query: 659 *FFGHPEVYILILPGFGIISHIIS 730
F+ HP VYI+ILP G++S I++
Sbjct: 285 WFYSHPAVYIMILPAMGMVSDILA 308
Score = 36.7 bits (81), Expect = 0.62
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 109 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDFDSYPPPLYY 288
+ Y +VT HA N L+PL++GA D+AFP +N + + P ++
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 575 ILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
+L +R + FF A GGD +L+ HLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +2
Query: 578 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S GK
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGK 328
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +2
Query: 575 ILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
+L +R FF A GGD +L+ HLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 303 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 401
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/53 (50%), Positives = 30/53 (56%)
Frame = +1
Query: 514 CRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 672
C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 100 CCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 208 LILGAPDIAFPRINNIDFDSYPPPL 282
L+LGAPD+AFPR+NN+ F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 662 FFGHPEVYILILPGFGIISHIISQERGKKK 751
FFGHPEVYILILPGFG+ISHI++ GKK+
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 247 NNIDFDSYPPPL 282
NNI F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 345 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 509
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFI 126
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 50.4 bits (115), Expect = 5e-05
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +2
Query: 623 GGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
GGG P+L+ HLF F+ HP VYI++LP G++S ++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 109 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIDF 261
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 691
++ IT AG IT+LL+DRN N FF GG PIL+ ++ FGH +V L
Sbjct: 20 SISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFL 79
Query: 692 IL 697
IL
Sbjct: 80 IL 81
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 73 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 246
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 247 NNIDFDSYPPPL 282
NNI F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 677 EVYILILPGFGIISHIISQERGKKK 751
EVYILILPGFG+ISHIISQE GKK+
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 649 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 747
+ ++IFW+S SLYFN IWYNF YY+T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 596 LNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
L S F+P GG P+LY F F+ HP VY+++LP GI + + S
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS 277
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 315 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 425
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 37.9 bits (84), Expect = 0.27
Identities = 25/69 (36%), Positives = 30/69 (43%)
Frame = +1
Query: 76 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 255
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 256 DFDSYPPPL 282
F PP L
Sbjct: 91 SFWLLPPSL 99
Score = 33.1 bits (72), Expect = 7.7
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 560 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*F 664
A AIT+L R N SFF P G P +P F F
Sbjct: 193 AAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +1
Query: 505 LLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 660
++ C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 83 IMICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Frame = +2
Query: 512 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYPHLF 658
++ +T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLF 257
Query: 659 *FFGHPEVYILILPGFGIISHIISQERGKK 748
FFGHPEVYI+ P G+++ G++
Sbjct: 258 WFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 662 FFGHPEVYILILPGFGIISHI 724
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +2
Query: 563 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHIIS 730
G +LL ++ S++ GG +++ +LF +FGHPEVY+L+LPG G + +S
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.3 bits (80), Expect = 0.82
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 605 SFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGIISHII 727
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 674 PEVYILILPGFGIISHIISQERGKK 748
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 626 GGDPILYPHLF*FFGHPEVYILILPGFGIISHIISQERG 742
G DP+L LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 4.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 638 ILYPHLF*FFGHPEVYILILPGFGIISHIISQERGK 745
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 632 DPILYPHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 745
+P+L LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.5 bits (73), Expect = 5.8
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +1
Query: 505 LLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SL 684
L+ +Y+ TT S S +N N SKL++I+ S PN I ILI T L
Sbjct: 89 LMKNPNYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGL 148
Query: 685 YFNFTRI 705
+ N T I
Sbjct: 149 HSNSTSI 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,964,808
Number of Sequences: 1657284
Number of extensions: 10129834
Number of successful extensions: 22721
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 21727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22666
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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