Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120126.Seq
(770 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 49 5e-06
SB_37456| Best HMM Match : DJ-1_PfpI (HMM E-Value=3) 48 6e-06
SB_8773| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_50424| Best HMM Match : DUF581 (HMM E-Value=5.1) 47 2e-05
SB_19629| Best HMM Match : CXC (HMM E-Value=0.1) 47 2e-05
SB_25037| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_38231| Best HMM Match : Yippee (HMM E-Value=4) 46 4e-05
SB_24133| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 45 6e-05
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 44 1e-04
SB_31862| Best HMM Match : E7 (HMM E-Value=4.4) 44 1e-04
SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037) 44 2e-04
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_39210| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_33741| Best HMM Match : Flavi_M (HMM E-Value=8.4) 40 0.002
SB_12474| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_38186| Best HMM Match : TrfA (HMM E-Value=1.4) 39 0.005
SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5) 39 0.005
SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_11609| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_43507| Best HMM Match : DUF35 (HMM E-Value=7.6) 33 0.25
SB_52937| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_33527| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_41206| Best HMM Match : DGOK (HMM E-Value=8.1) 31 0.78
SB_51447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_42074| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_18316| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_35012| Best HMM Match : Phosphodiest (HMM E-Value=0) 29 3.1
SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47) 29 3.1
SB_21555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_16286| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_45005| Best HMM Match : RVT_1 (HMM E-Value=6.6e-32) 29 5.5
SB_36117| Best HMM Match : Rubredoxin (HMM E-Value=1.8) 29 5.5
SB_38628| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 13 HEEADTKIVYHAC-SIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
HEEADT+++ +A + ++I+S DTD+ AI+ H + + G +K+RY
Sbjct: 394 HEEADTRMILNAAHAALTHSRVIIQSPDTDV-AILAIHARSQILCNELWFKTGAKDKVRY 452
Query: 190 IDLTEIYVKLGKSFCKSLPGF 252
+ + I KLG++ C +LPG+
Sbjct: 453 LPIHSISEKLGENVCNALPGY 473
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 553 LPPCKSELLQQFLRAYNYVSSIWNNTNQPILTILSTENNGW 675
LPP L RA NY + IW ++ + + ENNGW
Sbjct: 560 LPPTNDSLSHHIKRA-NYQAYIWRSSTTAMQNLPLPENNGW 599
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 48.8 bits (111), Expect = 5e-06
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = +1
Query: 16 EEADTKIVYHA--CSIRN-QVNIVIKSVDTDIPAIMLGHMHYLQ-NDSLI*MLIGTGNKL 183
EEADT++ +HA SI + + IV+ S DTD+ ++LG HY + + + G ++L
Sbjct: 1212 EEADTRLFFHAKHASINHPRYRIVVHSPDTDV--LVLGVCHYTRIGCDELWLKTGIKDRL 1269
Query: 184 RYIDLTEIYVKLGKSFCKSLPGF 252
R+I L + LG+ C +LPGF
Sbjct: 1270 RFIPLHAMAQHLGERMCDALPGF 1292
>SB_37456| Best HMM Match : DJ-1_PfpI (HMM E-Value=3)
Length = 232
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 13 HEEADTKIVYHA--CSIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
H+EADT+I+ H S R ++I++VDTD+ + + L + L + G G LR
Sbjct: 125 HKEADTRILLHVKHASARGMKKVLIRTVDTDVVILAVAFARKLPVEELW-VAFGVGKHLR 183
Query: 187 YIDLTEIYVKLGKSFCKSLPGF 252
Y+ + + L S C+ LP F
Sbjct: 184 YLQIHSMVDNLTTSQCEGLPFF 205
>SB_8773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 13 HEEADTKIVYHA--CSIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
H+EADT+I+ H S R ++I++VDTD+ + + L + L + G G LR
Sbjct: 317 HKEADTRILLHVKHASARGMKKVLIRTVDTDVVILAVAFARKLPVEELW-VAFGVGKHLR 375
Query: 187 YIDLTEIYVKLGKSFCKSLPGF 252
Y+ + + L S C+ LP F
Sbjct: 376 YLQIHSMVDNLTTSQCEGLPFF 397
>SB_50424| Best HMM Match : DUF581 (HMM E-Value=5.1)
Length = 496
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = +1
Query: 16 EEADTKIVYHACSIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRYID 195
EEADT++V HA + VI S DTD+ ++LGH H N S + G G K + I+
Sbjct: 344 EEADTRMVLHAQHSGGKC--VILSDDTDLLVMLLGHAH---NLSKCYLKKGRGEKSKIIE 398
Query: 196 LTEIYVKLGKSFCKSLPGFQRSQVM--IIILH 285
L+E+ K+G+ ++ PG + +V+ +I LH
Sbjct: 399 LSEVSDKVGR---RTAPGVSKEKVLQGLIGLH 427
>SB_19629| Best HMM Match : CXC (HMM E-Value=0.1)
Length = 491
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +1
Query: 16 EEADTKIVYHAC-SIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRYI 192
EEADT+I+ HA + + IVI S DTD+ I L ++ + I ++ Y+
Sbjct: 55 EEADTRILLHASHAAKAGYAIVISSEDTDVLIIALSLRSFIASPLFI--KTTKQSRTTYV 112
Query: 193 DLTEIYVKLGKSFCKSLPGFQRSQVMIIILHFFEKES*GLLKFKKTN 333
D++++ + +G C++L GF + FFEK LK N
Sbjct: 113 DVSKVVLVIGVQMCRALSGFHAFTGCDSVSAFFEKGKAKALKLLYQN 159
>SB_25037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 PKHEEADTKIVYHACSIRNQVN-IVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKL 183
P E DT+++ HA + + ++I+S+DTD+ A+ + H + + TG++
Sbjct: 8 PDSERTDTQMILHAAYDASDFSKVIIQSLDTDVLALRVTHFIAI---GWVWFRTSTGDRQ 64
Query: 184 RYIDLTEIYVKLGKSFCKSLPGF 252
R I + I+ +LG C+SLP F
Sbjct: 65 RLIPVHAIHERLGDRLCQSLPAF 87
>SB_38231| Best HMM Match : Yippee (HMM E-Value=4)
Length = 230
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 HEEADTKIVYHAC-SIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
HEEADT+I+ HA + + +VI+S DTD I+ H+ + + G +++R+
Sbjct: 68 HEEADTRILLHAAHASQEMTRVVIQSPDTD-ATILAIHVFERKGCRELWFKTGYKDRVRF 126
Query: 190 IDLTEIYVKLGKSFCKSLPG 249
I + + KLG C ++PG
Sbjct: 127 IPIHDAARKLGPKVCAAIPG 146
>SB_24133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +1
Query: 16 EEADTKIVYHACSIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRYID 195
EEADT+++ HA V+ S DTD+ I+LGH YL L GTG K R I+
Sbjct: 331 EEADTRMLLHAQHAGG--TCVVNSDDTDVLVILLGHAQYLGKRHL---KKGTGTKTRIIE 385
Query: 196 LTEIYVKLGK 225
L +I KL +
Sbjct: 386 LDQITRKLAR 395
>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 HEEADTKIVYHAC-SIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
HEEADT+I+ HA + + +VI+S DTD I+ H+ + + G +++R+
Sbjct: 610 HEEADTRILLHAAHASQEMTRVVIQSPDTD-ATILAIHVFERKGCRELWFKTGYKDRVRF 668
Query: 190 IDLTEIYVKLGKSFCKSLPG 249
I + + KLG C ++PG
Sbjct: 669 IPIHDAARKLGPKVCAAIPG 688
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 556 PPCKSELLQQFLRAYNYVSSIWNNTNQPILTILSTENNGW 675
PP L +RA NY + IW N QP++ + S + NGW
Sbjct: 778 PPTSDSLKLHIIRA-NYQTFIWKNCLQPMVPLSSPDGNGW 816
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 16 EEADTKIVYHA--CSIRN-QVNIVIKSVDTDIPAIMLGHMHYLQ-NDSLI*MLIGTGNKL 183
EEADT++ H SI + + IV+ S DTD+ ++LG HY + + + G ++L
Sbjct: 495 EEADTRLFLHVKHASINHPRCRIVVHSPDTDV--LVLGVCHYTRIGCHELWLKTGIKDRL 552
Query: 184 RYIDLTEIYVKLGKSFCKSLPGF 252
R+I L + LG+ C +LPGF
Sbjct: 553 RFIPLHAMAQHLGERMCDALPGF 575
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 514 FSRKKLRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPILTILSTENNGW 675
F +KK ++ LPP S LQ L NY + +W + + + + E++GW
Sbjct: 650 FCQKKQKS---ERLPPT-SNSLQHHLERANYQALVWRRSLEAMQDLPRPEDSGW 699
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 16 EEADTKIVYHA--CSIRN-QVNIVIKSVDTDIPAIMLGHMHYLQ-NDSLI*MLIGTGNKL 183
EEADT++ HA SI + + IV+ S DTD+ ++LG HY + + + G ++L
Sbjct: 805 EEADTRLFLHAKHASINHPRCRIVVHSPDTDV--LVLGVCHYTRIGCDELWLKTGIKDRL 862
Query: 184 RYIDLTEIYVKLGKSFCKSLPGF 252
R+I L + LG+ C +LP F
Sbjct: 863 RFIPLHAMAQHLGERMCDALPDF 885
>SB_31862| Best HMM Match : E7 (HMM E-Value=4.4)
Length = 584
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 16 EEADTKIVYHA--CSIRN-QVNIVIKSVDTDIPAIMLGHMHYLQ-NDSLI*MLIGTGNKL 183
EEADT++ HA SI + + IV+ S DTD+ ++LG HY + + + G ++L
Sbjct: 329 EEADTRLFLHAKHASINHPRCRIVVHSPDTDV--LVLGVCHYTRIGCDELWLKTGIKDRL 386
Query: 184 RYIDLTEIYVKLGKSFCKSLPGF 252
R+I L + LG+ C +LP F
Sbjct: 387 RFIPLHAMAQHLGERMCDALPDF 409
>SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037)
Length = 926
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 13 HEEADTKIVYHACSIRN--QVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
HEEADTK++ HA + +I I S DTD+ + L L D+ + G G++ R
Sbjct: 454 HEEADTKLLLHAVDATSFGATSIEIVSPDTDVFVVSLRRYSLLCEDTS--FVTGRGDRHR 511
Query: 187 YIDLTEIYVKLGKSFCKSLPGF 252
I L I LG + +LPGF
Sbjct: 512 KIKLGPIVRVLGPAKTAALPGF 533
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 HEEADTKIVYHAC-SIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
H+EADT+I+ HA + + +VI+S DTD+ AI+ H + G +++ +
Sbjct: 1074 HKEADTRILLHATHASQEMTRVVIQSPDTDV-AILAIHAFERMGCRELWFKTGYKDRVCF 1132
Query: 190 IDLTEIYVKLGKSFCKSLPG 249
I + + KLG C ++PG
Sbjct: 1133 IPIHDAARKLGPKVCAAIPG 1152
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 553 LPPCKSELLQQFLRAYNYVSSIWNNTNQPILTILSTENNG 672
LPP L Q +RA NY + IW QP++ + S + NG
Sbjct: 1240 LPPTSDSLKQHIIRA-NYQTFIWKYCLQPMVPLPSPDGNG 1278
>SB_39210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 13 HEEADTKIVYHAC-SIRNQVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
HEEADT+I+ HA + + +VI+S DTD+ I+ H+ + G +++R+
Sbjct: 284 HEEADTRILLHAAHASQEMTRVVIQSPDTDV-TILAIHVFERKGCREFGFKTGYKDRVRF 342
Query: 190 IDLTEIYVKLGKSFCKSLPGFQRSQV 267
I + + LG C ++ G ++
Sbjct: 343 IPIHDAARTLGPKVCAAIAGLHLKEL 368
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +1
Query: 13 HEEADTKIVY---HACSIRNQVNIVIKSVDTDIPAIMLGHMHYLQN 141
HEEADT+IV HA + +++++VDTDI I+ G H L++
Sbjct: 612 HEEADTRIVVHIRHAVETSHAKEVIVRTVDTDIVVILAGKFHQLKS 657
>SB_33741| Best HMM Match : Flavi_M (HMM E-Value=8.4)
Length = 502
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 16 EEADTKIV-YHACSIR-NQVNIVIKSVDTDIPAIMLGHMHYLQN-DSLI*MLIGTGNKLR 186
EE DT+++ Y ++R + V+++ DTDI I+ MHY + D I + IGTG +
Sbjct: 363 EETDTRVILYLKYAVRMGYESAVVRTQDTDILCIL---MHYAPSPDVNIYLDIGTGKNRK 419
Query: 187 YIDLTEIYVKLGKSFCKSLPG 249
I+++E+ G +C +L G
Sbjct: 420 LINVSELAESRGGEYCTALLG 440
>SB_12474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 16 EEADTKIV-YHACSIR-NQVNIVIKSVDTDIPAIMLGHMHYLQN-DSLI*MLIGTGNKLR 186
EE DT+++ Y ++R + V+++ DTDI I+ MHY + D I + IGTG +
Sbjct: 1153 EETDTRVILYLKYAVRMGYESAVVRTPDTDILCIL---MHYAPSLDVNIYLDIGTGKNRK 1209
Query: 187 YIDLTEIYVKLGKSFCKSLPG 249
I+ +E+ G +C +L G
Sbjct: 1210 LINFSELAESRGGEYCTALLG 1230
>SB_38186| Best HMM Match : TrfA (HMM E-Value=1.4)
Length = 429
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 16 EEADTKIVYHACSIRNQ--VNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
EEADT+++ HA + IVI S D D+ + L ++Q + M GT + ++
Sbjct: 347 EEADTRLLLHAHNAARDGAPAIVISSDDADVFLLCLAFKSFIQPP--VYMKCGTQARTKF 404
Query: 190 IDLTEIYVKLGKSFCKSLPG 249
I++T + G S C+ L G
Sbjct: 405 INITSVVQLHGPSLCRCLLG 424
>SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5)
Length = 715
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 514 FSRKKLRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPILTILSTENNGW 675
F RKK LPP S+ L ++ NY + IW ++ P+ + S ENNGW
Sbjct: 23 FCRKKQTR---ECLPPI-SDSLSHIIKKANYQACIWGSSTTPLQNLPSPENNGW 72
>SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 36.3 bits (80), Expect = 0.027
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Frame = +1
Query: 13 HEEADTKI---VYHACSIRNQVNIVIKSVDTDIPAIMLGHMHYLQ--NDSLI*MLI--GT 171
HEEADT++ V HA S +V+++VDTD+ I + + LQ + + + +L+ GT
Sbjct: 1230 HEEADTRMFLHVAHALS-SGSTRVVLRTVDTDVLVIAVAYFQKLQMLSQASVGLLVAFGT 1288
Query: 172 GNKLRYIDLTEI 207
G LR I E+
Sbjct: 1289 GAYLRDIAAHEV 1300
>SB_11609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 35.1 bits (77), Expect = 0.063
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 13 HEEADTKIVYHACSIRN--QVNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
HEEADTK++ HA + +I + S DTD+ + L L D+ + G G++ R
Sbjct: 92 HEEADTKLLLHAVDATSFGATSIEMVSPDTDVLVLSLRRYSLLCEDTS--FVTGRGDRHR 149
Query: 187 YIDLTEIYVKLGKSFCKSLPGF 252
I L I LG + +L GF
Sbjct: 150 KIKLGPIVRVLGPAKTAAL-GF 170
>SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +1
Query: 46 ACSIR--NQVNIVIKSV-DTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRYIDLTEIYVK 216
AC +R +N +I+S+ DTD+ A+ + H ++ +L T ++ +I + I+ +
Sbjct: 279 ACCLRCNRLLNSIIQSLPDTDVLALCVTHFIFIGCQALW-FRASTCDRQSFIPVHSIHER 337
Query: 217 LGKSFCKSLP 246
LG+ C+SLP
Sbjct: 338 LGERLCQSLP 347
>SB_43507| Best HMM Match : DUF35 (HMM E-Value=7.6)
Length = 326
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 13 HEEADTKIVYHACSIRNQ--VNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
HEEAD++++ H +Q I +++VDTD+ + + + L + + TG R
Sbjct: 125 HEEADSRVILHVKDAHDQGFTKIAVRTVDTDVLVLSVAVLPLLPIQPKLWVAFDTGANFR 184
Query: 187 YI 192
I
Sbjct: 185 CI 186
>SB_52937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQVNIVIKSVDTDIPAIMLGH 123
+ E+ADT+I+ A + VNIV+ + DTD+ ++ H
Sbjct: 232 EREDADTRIILLAVNPIGYVNIVVSARDTDVLLLLSAH 269
>SB_33527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQVNIVIKSVDTDIPAIMLGH 123
+ E+ADT+I+ A + VNIV+ + DTD+ ++ H
Sbjct: 34 EREDADTRIILLAVNPIGYVNIVVSARDTDVLLLLSAH 71
>SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 16 EEADTKIVYHACSIRNQ--VNIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRY 189
EEADT+++ HA + IVI S D D+ + L ++Q + M GT + ++
Sbjct: 357 EEADTRLLLHAHNAARDGAPAIVISSDDADVFLLCLAFKSFIQPP--VYMKCGTQARTKF 414
Query: 190 IDLTEI 207
I++T +
Sbjct: 415 INITSV 420
>SB_41206| Best HMM Match : DGOK (HMM E-Value=8.1)
Length = 295
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQV-NIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
+ E+ADT+I+ A + V NIV+ + DTD+ ++L H + S + + T K
Sbjct: 186 EREDADTRIILLAVNPIGYVRNIVVSARDTDV--LLLLSAHRSKITSKVWIWADTAKKPV 243
Query: 187 YIDLTEIYVKLGKSFCKSLPGFQ 255
I + ++ + L K F +L F+
Sbjct: 244 NITMEDVLLHLQKRFVDALLPFR 266
>SB_51447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQV-NIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
+ E+ADT+I+ A + V NIV+ + DTD+ ++L H + S + + T K
Sbjct: 34 EREDADTRIILLAVNPIGYVHNIVVSARDTDV--LLLLSAHRSKITSKVWIWADTAKKPV 91
Query: 187 YIDLTEIYVKLGKSFCKSLPGFQ 255
I + ++ + L +F +L F+
Sbjct: 92 NITMEDVLLHLQMAFVDALLPFR 114
>SB_42074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQV-NIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
+ E+ADT+I+ A + V NIV+ + DTD+ ++L H + S + + T K
Sbjct: 196 EREDADTRIILLAVNPIGYVRNIVVSARDTDV--LLLLSAHRSKITSKVWIWADTAKKPV 253
Query: 187 YIDLTEIYVKLGKSFCKSLPGFQ 255
I + ++ + L +F +L F+
Sbjct: 254 NIPMEDVLLHLQMAFVDALLPFR 276
>SB_18316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQV-NIVIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLR 186
+ E+ADT+I+ A + V NIV+ + DTD+ ++L H + S + + T K
Sbjct: 34 EREDADTRIILLAVNPIGYVRNIVVSARDTDV--LLLLSAHRSKITSKVWIWADTAKKPV 91
Query: 187 YIDLTEIYVKLGKSFCKSLPGFQ 255
I + ++ + L +F +L F+
Sbjct: 92 NITMEDVLLHLQMAFVDALLPFR 114
>SB_35012| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 412
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 672 LGFSKIISTIFKWFEGDELPNFV 740
+ F K + T+ KWF + PNFV
Sbjct: 179 MSFDKRVQTVVKWFSDERPPNFV 201
>SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47)
Length = 690
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 175 NKLRYIDLTEIYVKLGKSFCKSLPGFQRSQVMIIILHFFEKES*GLLKFKKTN 333
++ Y+D++++ + +G C++L GF + FFEK LK N
Sbjct: 591 SRTTYVDVSKVVLVIGVQMCRALSGFHAFTGCDSVSAFFEKGKAKALKLLYQN 643
>SB_21555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 7 PKHEEADTKIVYHACSIRNQVNIVIKSVDTDIPAIMLGH 123
P E DT++V A + + VI+S DTD+ A+ + H
Sbjct: 9 PDPERTDTRMVLLAAYDASDFSTVIQSPDTDVLALCVTH 47
>SB_16286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 76 VIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRYIDLTEIYVKLGKSFCKSLPG 249
VI+S DTD+ + + H + G +++R+I + + KLG C ++PG
Sbjct: 44 VIQSPDTDVDILAI-HAFERMGCRELWFKTGYKDRVRFIPIHDAARKLGPKVCAAIPG 100
>SB_45005| Best HMM Match : RVT_1 (HMM E-Value=6.6e-32)
Length = 871
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 523 KKLRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPIL 645
+KL+NF+ + + L FL +YN + +WNN + L
Sbjct: 298 RKLKNFNYDAFRADIASLNWNFLNSYNDPNVMWNNWKEMFL 338
>SB_36117| Best HMM Match : Rubredoxin (HMM E-Value=1.8)
Length = 996
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 76 VIKSVDTDIPAIMLGHMHYLQNDSLI*MLIGTGNKLRYIDLTEIYVKLGKSFCKSLPG 249
VI+S DTD+ + + H + G +++R+I + + KLG C ++PG
Sbjct: 915 VIQSPDTDVDILAI-HAFERMGCRELWFKTGYKDRVRFIPIHDAARKLGPKVCAAIPG 971
>SB_38628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQV-NIVIKSVDTDIPAIMLGH 123
+ E+ADT+I+ A + V NIV+ + DTD+ ++ H
Sbjct: 34 EREDADTRIILLAVNPIGYVRNIVVSARDTDVLLLLSAH 72
>SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 10 KHEEADTKIVYHACSIRNQV-NIVIKSVDTDIPAIMLGH 123
+ E+ADT+I+ A + V NIV+ + DTD+ ++ H
Sbjct: 172 EREDADTRIILLAVNPIGYVRNIVVSARDTDVLLLLSAH 210
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,960,943
Number of Sequences: 59808
Number of extensions: 423561
Number of successful extensions: 880
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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