Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120126.Seq
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81527-5|CAB04273.2| 350|Caenorhabditis elegans Hypothetical pr... 29 4.8
EU052682-1|ABU48855.1| 278|Caenorhabditis elegans heparan sulfa... 29 4.8
AF098987-1|AAC67432.1| 276|Caenorhabditis elegans Heparan sulph... 29 4.8
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 28 6.4
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 28 6.4
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z72508-3|CAA96636.1| 294|Caenorhabditis elegans Hypothetical pr... 28 6.4
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 28 6.4
Z81116-6|CAB03299.1| 416|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z81527-5|CAB04273.2| 350|Caenorhabditis elegans Hypothetical
protein F35E12.6 protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +2
Query: 329 QTAFIKFGKHELFENNNEQQSTFDIIQRFICEVYNVGSITDVDAARLQLFINTYQVSDIN 508
Q+ F +E+F + + + + RF E+Y+ + F+N Y+ +
Sbjct: 169 QSGFADSSIYEIFVFDGNDITNAEYLGRFT-ELYHAPQYAIYSTSNTLTFLNLYRTPSNS 227
Query: 509 KRLA-----VKNYEILMLAVCHHVNP 571
LA ++NYE+ + V VNP
Sbjct: 228 MLLANDASVIENYEVYNIMVLDSVNP 253
>EU052682-1|ABU48855.1| 278|Caenorhabditis elegans heparan sulfate
3-O sulfotransferaseisoform a protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 117 WSYALSTK*FTYLNADRHWE*VEIHRPHRDLRKVRKIFLQELTRIPAITGYDYNPAFF 290
W K F ++N D V P R+LRKV + E + P+ +DYN FF
Sbjct: 203 WLKYFDLKNFLFVNGD-----VFRANPLRELRKVEEFLGLERSITPSQLVFDYNKGFF 255
>AF098987-1|AAC67432.1| 276|Caenorhabditis elegans Heparan
sulphotransferase protein 3 protein.
Length = 276
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +3
Query: 117 WSYALSTK*FTYLNADRHWE*VEIHRPHRDLRKVRKIFLQELTRIPAITGYDYNPAFF 290
W K F ++N D V P R+LRKV + E + P+ +DYN FF
Sbjct: 203 WLKYFDLKNFLFVNGD-----VFRANPLRELRKVEEFLGLERSITPSQLVFDYNKGFF 255
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z72508-3|CAA96636.1| 294|Caenorhabditis elegans Hypothetical
protein F28H7.3 protein.
Length = 294
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 288 FRKGKLRPFKI*KNKQLSLNSVNTNYSKIIMNNKALLILFNG 413
F KL+ KN L N V + Y+ ++ N+KA++I F G
Sbjct: 56 FTNAKLQRQIYVKNCALVSNDVCSGYTAVLHNDKAIVISFRG 97
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 529 LRNFDVSSLPPCKSELLQQFLRAYNYVSSIWNNTNQPI 642
+R F S++PP S +QF + Y Y SS + P+
Sbjct: 305 VREFGESAVPPAASSSRRQFDQVYGYASSSEERYDTPM 342
>Z81116-6|CAB03299.1| 416|Caenorhabditis elegans Hypothetical
protein T06C12.7 protein.
Length = 416
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 117 KHDSWNVSVDTFDHNIY 67
K + W +SVDTF H +Y
Sbjct: 245 KFEKWLISVDTFGHKVY 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,909,814
Number of Sequences: 27780
Number of extensions: 346774
Number of successful extensions: 854
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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