Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120125.Seq
(707 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 111 5e-25
02_02_0572 + 11667455-11670783,11672026-11672419 103 1e-22
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 100 2e-21
05_04_0174 - 18728199-18731411 97 9e-21
06_02_0263 - 13566621-13569875 94 8e-20
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 93 1e-19
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 91 6e-19
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 83 2e-16
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 80 1e-15
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 77 1e-14
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 76 3e-14
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 75 7e-14
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 70 2e-12
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 67 1e-11
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 63 2e-10
11_04_0454 - 17895935-17896093,17896878-17896911,17897114-178972... 52 4e-07
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 40 0.003
03_02_0587 + 9669283-9670497 39 0.003
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 30 1.6
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 30 2.1
07_03_1670 - 28505732-28506426,28508202-28509309 29 4.8
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 28 6.3
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 28 6.3
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 28 8.4
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 28 8.4
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 28 8.4
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 28 8.4
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 111 bits (267), Expect = 5e-25
Identities = 48/64 (75%), Positives = 61/64 (95%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
+G+EVGYSIRFEDCS +T+LKY+TDGMLLREAM+DP++E+Y+VI+LDEAHERTLATD+L
Sbjct: 139 IGEEVGYSIRFEDCSSHKTVLKYLTDGMLLREAMADPLLERYKVIVLDEAHERTLATDVL 198
Query: 693 MGVL 704
G+L
Sbjct: 199 FGLL 202
Score = 106 bits (254), Expect = 2e-23
Identities = 52/83 (62%), Positives = 64/83 (77%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
E+L KR LPVW+ K+DF+ +L +Q ++LVGETGSGKTTQIPQ+ +E GL
Sbjct: 57 EILEKRRTLPVWQQKDDFLAVLRDNQTLILVGETGSGKTTQIPQFVLE---AEGLSNRSM 113
Query: 439 VACTQPRRVAAMSVAQRVAEEMD 507
VACTQPRRVAAMSV++RVAEEMD
Sbjct: 114 VACTQPRRVAAMSVSRRVAEEMD 136
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 103 bits (247), Expect = 1e-22
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG+EVGY+IRFEDC+GP T++KYMTDGMLLRE + D + QY VI+LDEAHERT+ T
Sbjct: 657 GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHT 716
Query: 684 DILMGVL 704
D+L G+L
Sbjct: 717 DVLFGLL 723
Score = 78.6 bits (185), Expect = 5e-15
Identities = 39/77 (50%), Positives = 57/77 (74%)
Frame = +1
Query: 271 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 450
+R LP+++ K + ++ ++ +Q +V++GETGSGKTTQ+ Q+ E A + GK + CT
Sbjct: 583 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE-AGYTTRGK---IGCT 638
Query: 451 QPRRVAAMSVAQRVAEE 501
QPRRVAAMSVA+RVAEE
Sbjct: 639 QPRRVAAMSVAKRVAEE 655
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHER 671
S+ G LG EVGYSIRFEDC+ +TL+KYMTDGMLLRE + +P + Y V+++DEAHER
Sbjct: 483 SQEMGVKLGHEVGYSIRFEDCTSEKTLIKYMTDGMLLREFLGEPDLASYSVVMVDEAHER 542
Query: 672 TLATDILMGVL 704
TL+TDIL G++
Sbjct: 543 TLSTDILFGLV 553
Score = 85.0 bits (201), Expect = 5e-17
Identities = 43/78 (55%), Positives = 60/78 (76%)
Frame = +1
Query: 271 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACT 450
+R LP+++++++ ++ + +Q IV+VGETGSGKTTQIPQ+ E A + GK VACT
Sbjct: 413 ERKTLPIYKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHE-AGYTAKGK---VACT 468
Query: 451 QPRRVAAMSVAQRVAEEM 504
QPRRVAAMSVA RV++EM
Sbjct: 469 QPRRVAAMSVAARVSQEM 486
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/67 (64%), Positives = 55/67 (82%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG EVGYSIRFEDC+ +T++KYMTDGMLLRE + +P + Y V+++DEAHERTLAT
Sbjct: 476 GVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLREFLGEPDLGSYSVVVVDEAHERTLAT 535
Query: 684 DILMGVL 704
DIL G++
Sbjct: 536 DILFGLV 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/92 (53%), Positives = 65/92 (70%)
Frame = +1
Query: 229 YWSSAFTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFA 408
Y + A L +R LPV++ K+D ++ ++ H+ +++VGETGSGKTTQIPQ+ E
Sbjct: 386 YHAEAMDAKATLQDERKTLPVYKLKDDLLKAIDEHKVLIVVGETGSGKTTQIPQYLHEVG 445
Query: 409 AVSGLGKAKGVACTQPRRVAAMSVAQRVAEEM 504
+G G+ K VACTQPRRVAAMSVA RVAEEM
Sbjct: 446 YTAG-GRKK-VACTQPRRVAAMSVAARVAEEM 475
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHER 671
S G LG+EVGYSIRF+D +GP T++KYMTDGMLLRE + D + Y V++LDEAHER
Sbjct: 497 SEEFGCRLGEEVGYSIRFDDHTGPDTVIKYMTDGMLLREILLDTDLSSYSVVMLDEAHER 556
Query: 672 TLATDILMGVL 704
T+ TDIL +L
Sbjct: 557 TIYTDILFALL 567
Score = 78.6 bits (185), Expect = 5e-15
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +1
Query: 262 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 441
+L +R LP++ KN+ + + +Q +V++GETGSGKTTQ+ Q+ E ++ GK +
Sbjct: 424 ILEQRQSLPIFRLKNELIEAVRDNQVLVVIGETGSGKTTQVTQYLAEAGYIT-RGK---I 479
Query: 442 ACTQPRRVAAMSVAQRVAEE 501
ACTQPRRVAA SVA+RV+EE
Sbjct: 480 ACTQPRRVAAESVAKRVSEE 499
>07_03_0539 -
19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/64 (60%), Positives = 54/64 (84%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
LG +VGY+IRFED + P T++KYMTDG+LLRE + D +++YRVI++DEAHER+L TD+L
Sbjct: 693 LGHKVGYAIRFEDMTSPNTIIKYMTDGVLLRETLKDADLDKYRVIVMDEAHERSLNTDVL 752
Query: 693 MGVL 704
G+L
Sbjct: 753 FGIL 756
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = +1
Query: 316 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVA 495
+++ +Q +V+VGETGSGKTTQ+ Q+ E G V CTQPRRVAAMSVA+RV+
Sbjct: 631 KVVRENQVVVVVGETGSGKTTQLTQYLHE----DGYTTTGIVGCTQPRRVAAMSVAKRVS 686
Query: 496 EEMD 507
EEM+
Sbjct: 687 EEME 690
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 91.5 bits (217), Expect = 6e-19
Identities = 39/64 (60%), Positives = 55/64 (85%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
LG++VGYSIRF+D + T +KYMTDG+LLREA+ DP++ +Y VI++DEAHERT+ TD+L
Sbjct: 105 LGKKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSVIVVDEAHERTVHTDVL 164
Query: 693 MGVL 704
+G+L
Sbjct: 165 LGLL 168
Score = 64.9 bits (151), Expect = 6e-11
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 ELLRK-RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAK 435
+L+R+ R LP+ + + + + +++VGETGSGKTTQ+PQ+ + A GK
Sbjct: 22 QLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYD-AGFCQDGKVI 80
Query: 436 GVACTQPRRVAAMSVAQRVAEE 501
G+ TQPRRVAA++VA+RVAEE
Sbjct: 81 GI--TQPRRVAAVTVAKRVAEE 100
>04_03_0985 -
21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/85 (44%), Positives = 59/85 (69%)
Frame = +1
Query: 247 TTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLG 426
+++ ++L R LP+ +K+ F++LL + IV+ GETG GKTTQ+PQ+ ++ S LG
Sbjct: 577 SSYLKMLEARASLPISRFKDHFLQLLKENDVIVVCGETGCGKTTQVPQFILDDMIESELG 636
Query: 427 KAKGVACTQPRRVAAMSVAQRVAEE 501
+ CTQPRR+AA+SVA+RV+ E
Sbjct: 637 GYCSIVCTQPRRIAAISVAERVSSE 661
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 525 VGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDILMGVL 704
VGY +R + +T L + T G+LLR+ + + +++DE HERT+ D L+ VL
Sbjct: 674 VGYQVRLDSARNERTKLLFCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVL 733
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/67 (53%), Positives = 52/67 (77%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG+EVG+ +R + G + +K+MTDG+LLRE SD ++++Y VI+LDEAHER+L T
Sbjct: 316 GLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLREVQSDFLLKRYSVIILDEAHERSLNT 375
Query: 684 DILMGVL 704
DIL+G+L
Sbjct: 376 DILIGML 382
Score = 64.5 bits (150), Expect = 8e-11
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +1
Query: 256 HELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFA-AVSGLGKA 432
HE+ + R LP+ + + M + + ++L GETG GKTTQ+PQ+ E S
Sbjct: 231 HEVEKTRRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAGFGTSNRSDR 290
Query: 433 KG-VACTQPRRVAAMSVAQRVAEEMDGLWVRKLV 531
KG + TQPRRVA ++ A+RV+ E+ GL + K V
Sbjct: 291 KGIIGITQPRRVAVLATARRVSYEL-GLKLGKEV 323
>07_03_1304 -
25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/86 (41%), Positives = 58/86 (67%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
E R + GLP++ Y+ + + + +Q ++L+GETGSGK+TQ+ V++ A SGL
Sbjct: 255 ECRRLKEGLPIYAYRRNILDHIFANQVMILIGETGSGKSTQL----VQYLADSGLAANGS 310
Query: 439 VACTQPRRVAAMSVAQRVAEEMDGLW 516
+ CTQPR++AA+S+A RV EE +G +
Sbjct: 311 IVCTQPRKIAAISLAHRVVEESNGCY 336
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 579 YMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDILMGVL 704
Y TD LL M+D ++ I++DEAHER+L TD+L+ ++
Sbjct: 358 YTTDNCLLHHCMNDMGLDGISYIIVDEAHERSLNTDLLLALI 399
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
++L R LP ++ K + + +Q IV+ GETG GKTTQ+PQ+ +E SG G
Sbjct: 255 KMLEFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCN 314
Query: 439 VACTQPRRVAAMSVAQRVAEE 501
+ CTQPRR++AM+VA+RV+ E
Sbjct: 315 IICTQPRRISAMAVAERVSTE 335
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/71 (39%), Positives = 38/71 (53%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHER 671
S G LG+ VGY +R E G T L + T G+LLR +SD + + +DE HER
Sbjct: 333 STERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHER 392
Query: 672 TLATDILMGVL 704
+ D L+ VL
Sbjct: 393 GMNEDFLLIVL 403
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
++++ R LP+ YK+ L HQ +++ GETG GKTTQ+PQ+ ++ + G G++
Sbjct: 271 KIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDH--MWGKGESCK 328
Query: 439 VACTQPRRVAAMSVAQRVAEE 501
+ CTQPRR++A+SVA+R++ E
Sbjct: 329 IVCTQPRRISAISVAERISAE 349
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQ-YRVIL------ 650
S G ++G VGY IR E G + + + T+G+LLR + + E Y++ L
Sbjct: 347 SAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRRIAENIYQLFLCNSERA 406
Query: 651 --LDEAHERTLATDILMGVL 704
LDE HER +D ++ +L
Sbjct: 407 EHLDEIHERDRFSDFMLAIL 426
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +1
Query: 283 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
LP ++ + +F++ + +Q +V+ GETG GKTTQ+PQ+ +E + G + CTQPRR
Sbjct: 1141 LPAFKMREEFLKAVAANQVLVISGETGCGKTTQLPQFILEEEIDNLRGADCSIICTQPRR 1200
Query: 463 VAAMSVAQRVAEE 501
++A+SVA R+A E
Sbjct: 1201 ISAISVAARIASE 1213
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG VGY IR E QT L + T G+LLR + +P + +L+DE HER +
Sbjct: 1215 GEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRLVQEPDLVGVSHLLVDEIHERGMNE 1274
Query: 684 DILMGVL 704
D L+ +L
Sbjct: 1275 DFLIIIL 1281
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = +1
Query: 235 SSAFTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV 414
SS+ + L R+R LPV++Y+ + L+ H ++VGETGSGK+TQIPQ+ E
Sbjct: 35 SSSGFGYASLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKSTQIPQYLKEAGWA 94
Query: 415 SGLGKAKGVACTQPRRVAAMSVAQRVAEEMDGLWVRKLV 531
G + + CTQPRR+A + + DG+ +R+++
Sbjct: 95 EG---GRLIGCTQPRRLAVQGMTM-IKFLTDGVLIREMM 129
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 504 GWALGQE-VGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYR 641
GWA G +G + T++K++TDG+L+RE M DP++ +YR
Sbjct: 92 GWAEGGRLIGCTQPRRLAVQGMTMIKFLTDGVLIREMMEDPLLTKYR 138
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = +1
Query: 283 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
LP+ E++++ M + + +V++GETGSGK+TQ+ Q G + +A TQPRR
Sbjct: 15 LPISEHEDEIMAAVEANPVVVVIGETGSGKSTQLSQ----ILHRRGYTRRGAIAVTQPRR 70
Query: 463 VAAMSVAQRVAEEM 504
VAA+SV++RVA+E+
Sbjct: 71 VAAVSVSRRVAQEL 84
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLR 605
LG EVGY+IRFED + +T + + G++ R
Sbjct: 88 LGDEVGYAIRFEDRTSEKTCINDILLGLMKR 118
>11_04_0454 -
17895935-17896093,17896878-17896911,17897114-17897252,
17897487-17897561,17897666-17897945
Length = 228
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +1
Query: 247 TTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGK 372
T+ + L KR LPVW+ K+DF+ +L+ +Q ++LVGETGSGK
Sbjct: 50 TSSPKTLEKRRTLPVWQLKDDFLAVLHDNQALILVGETGSGK 91
>01_01_1089 -
8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSG---PQTLLKYMTDGMLLREAMSDPMVE--QYRVILLDEAHERTL 677
+G+EVGY I + S ++ + + T G++L E M D + Y+VI+LDE HER++
Sbjct: 333 VGEEVGYHIGHSNVSNLNSKRSRIVFKTAGVVL-EQMRDKGIAALNYKVIILDEIHERSV 391
Query: 678 ATDILM 695
+D+++
Sbjct: 392 ESDLVL 397
>03_02_0587 + 9669283-9670497
Length = 404
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 573 LKYMTDGMLL-REAMSDPMVEQYRVILLDEAHERTLATDILMGVL 704
+++ T LL R + P++ Y +++DEAH+RTL TD+L+G++
Sbjct: 85 IEFTTTRQLLDRFSSPAPVLAGYGAVVIDEAHDRTLGTDVLLGMV 129
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 313 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRV 492
+ L H+ +V+ GSGK++ +P+ E SG G V C QPR +AA +V
Sbjct: 25 LEYLEDHRVVVVSAAPGSGKSSVLPRCLAE----SGYGP---VLCAQPRHLAAFVAMAKV 77
Query: 493 AEEMD 507
EE D
Sbjct: 78 GEEWD 82
>01_06_0555 -
30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 307 DFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 441
DF + Q + LVG +GSGK+T I + A G K GV
Sbjct: 384 DFNLQIPAGQTVALVGSSGSGKSTAIALVQRFYDATEGTVKVDGV 428
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 277 LGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV-SGLGKAKG 438
+GL V+ Y F R++ T + L+G TGSG WS +F A S LG G
Sbjct: 782 VGLHVFRY---FERVMATESAVRLIGGTGSG------NWSKDFGAFDSSLGSLSG 827
>07_03_1670 - 28505732-28506426,28508202-28509309
Length = 600
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 268 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQ 390
R R G P W +D RL V+V + GSGK T + +
Sbjct: 243 RVRRGFPSWVSASDRRRLQQQVAADVVVAKDGSGKFTTVSE 283
>01_06_0366 - 28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 304 NDFMRLLNTHQCIVLVGETGSGKTTQI 384
+DF + + + I LVGE+GSGK+T I
Sbjct: 957 SDFTLHIPSQKTIALVGESGSGKSTII 983
>01_05_0212 + 19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 331 HQCIVLVGETGSGKTTQI 384
H + LVGE+GSGK+T I
Sbjct: 1067 HNTVALVGESGSGKSTAI 1084
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 461 RLG*VQATPLALPRPLTAANSTDHWGIWVVFPDPVSPTSTIH 336
R G + P+A P+ + + D W +FP PV+P +H
Sbjct: 1510 RGGLINVGPVA-PQMSRSGSDADRWQQKGIFPSPVTPMQVMH 1550
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 325 NTHQCIVLVGETGSGKTTQI 384
N Q IV++GE G+GKTT I
Sbjct: 375 NDSQIIVMLGENGTGKTTFI 394
>01_06_0371 + 28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 304 NDFMRLLNTHQCIVLVGETGSGKTTQI 384
+DF + + + + LVGE+GSGK+T I
Sbjct: 1050 SDFTLHIPSGKTVALVGESGSGKSTAI 1076
>01_02_0042 - 10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 286 PVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQI 384
P E D +++ + + LVGE+GSGK+T I
Sbjct: 1054 PDVEIFRDLCLTIHSGKTVALVGESGSGKSTAI 1086
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,239,942
Number of Sequences: 37544
Number of extensions: 411652
Number of successful extensions: 1157
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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