Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120125.Seq
(707 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 82 5e-16
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 77 1e-14
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 70 2e-12
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 52 6e-07
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 44 9e-05
SB_36064| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5) 38 0.006
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 35 0.023
SB_27281| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 31 0.69
SB_13012| Best HMM Match : TrbC (HMM E-Value=1.4) 31 1.2
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 31 1.2
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 29 3.7
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.9
SB_458| Best HMM Match : DUF19 (HMM E-Value=1.5) 29 4.9
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 4.9
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 4.9
SB_4502| Best HMM Match : SpoIIIAC (HMM E-Value=2.8) 26 5.9
SB_40003| Best HMM Match : YTV (HMM E-Value=8.9) 28 6.5
SB_13170| Best HMM Match : YTV (HMM E-Value=2.8) 28 6.5
SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17) 28 6.5
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 8.5
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 98.7 bits (235), Expect = 4e-21
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHER 671
S G LGQEVGY+IRFEDC+ P+T +KYMTDG LLRE + DP ++QY VI+LDEAHER
Sbjct: 344 SEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGFLLRECLIDPELKQYSVIMLDEAHER 403
Query: 672 TLATDILM 695
+ TD+L+
Sbjct: 404 VIHTDVLL 411
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/80 (47%), Positives = 63/80 (78%)
Frame = +1
Query: 262 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 441
++++R GLP+++ +++ ++ ++ +Q ++++GETGSGKTTQI Q+ E ++ GK +
Sbjct: 271 IIQQREGLPIFKLRDELVKAVHQNQVLIVIGETGSGKTTQITQYLAEQGFLT-QGK---L 326
Query: 442 ACTQPRRVAAMSVAQRVAEE 501
ACTQPRRVAAMSVA+RV+EE
Sbjct: 327 ACTQPRRVAAMSVAKRVSEE 346
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/71 (57%), Positives = 58/71 (81%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHER 671
SR G LG+EVGY++RFED + +T +KYMTDGMLLRE++ D ++++Y VI+LDEAHER
Sbjct: 124 SREMGVQLGEEVGYTVRFEDVTSTKTRIKYMTDGMLLRESIGDSLLKRYSVIILDEAHER 183
Query: 672 TLATDILMGVL 704
T+ TD+L G++
Sbjct: 184 TIHTDVLFGIV 194
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +1
Query: 268 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 447
R++L LP++ + + + Q +++VGETGSGKTTQIPQ+ E + + + +AC
Sbjct: 53 RQKLSLPIFSARKSLITEIRNRQNVIIVGETGSGKTTQIPQYLYE----AKVARNSVIAC 108
Query: 448 TQPRRVAAMSVAQRVAEEM 504
TQPRRVAA+S+AQRV+ EM
Sbjct: 109 TQPRRVAAISIAQRVSREM 127
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 81.8 bits (193), Expect = 5e-16
Identities = 41/91 (45%), Positives = 61/91 (67%)
Frame = +1
Query: 235 SSAFTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAV 414
SS F + L+++R LP++ + + + ++ +Q +++VGETGSGKTTQ+ Q+ E
Sbjct: 593 SSDFASKKSLVQQRQYLPIFAVRQELLSIVRDNQVVIIVGETGSGKTTQLTQYMHE---- 648
Query: 415 SGLGKAKGVACTQPRRVAAMSVAQRVAEEMD 507
G + CTQPRRVAAMSVA+RV+EEMD
Sbjct: 649 DGYTNYGMIGCTQPRRVAAMSVAKRVSEEMD 679
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +3
Query: 510 ALGQEVGYSIRFED 551
+LG+EVGY+IRFED
Sbjct: 681 SLGEEVGYAIRFED 694
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/84 (41%), Positives = 57/84 (67%)
Frame = +1
Query: 250 TFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 429
TF +L +R LPV+ YK+ ++ ++ ++ I++ G TG GKTTQ+PQ+ ++ +G G
Sbjct: 296 TFKAMLEQRSQLPVFNYKHAILQAVHENRVIIIKGATGCGKTTQVPQFVLDAFLENGQGA 355
Query: 430 AKGVACTQPRRVAAMSVAQRVAEE 501
+ TQPRR++A+SVA+RVA E
Sbjct: 356 ECNIVVTQPRRISAVSVAERVAAE 379
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 70.1 bits (164), Expect = 2e-12
Identities = 40/91 (43%), Positives = 57/91 (62%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
E R LP++ K+ ++ + +Q VL+GETGSGK+TQI Q+ + +GL
Sbjct: 715 EKRRLESALPIYARKSQIIQTIKDNQVTVLIGETGSGKSTQIGQYLYD----AGLADKGQ 770
Query: 439 VACTQPRRVAAMSVAQRVAEEMDGLWVRKLV 531
+ CTQPR+VAA S+AQ+V+ EM G V KLV
Sbjct: 771 IVCTQPRKVAATSLAQQVSREM-GQKVGKLV 800
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 69.3 bits (162), Expect = 3e-12
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
E+ RL LP+ + M ++ + ++L GETGSGKTTQ+PQ+ E +G K
Sbjct: 286 EIQAARLQLPILAEEQAIMEAISENNVVILCGETGSGKTTQVPQFLYE----AGYTKRGL 341
Query: 439 VACTQPRRVAAMSVAQRVAEEM 504
+ T+PRRVAA+S++QRVA+EM
Sbjct: 342 IGITEPRRVAAVSMSQRVAKEM 363
Score = 68.5 bits (160), Expect = 5e-12
Identities = 27/61 (44%), Positives = 48/61 (78%)
Frame = +3
Query: 522 EVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDILMGV 701
+V Y IR++ + +T++K+MTDG++L+E D ++ +Y V+++DEAHER++ TDIL+G+
Sbjct: 369 KVSYQIRYQGNTSDETVIKFMTDGVMLKEVEKDFLLSKYSVVVIDEAHERSVYTDILIGL 428
Query: 702 L 704
L
Sbjct: 429 L 429
>SB_36410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/86 (34%), Positives = 53/86 (61%)
Frame = +1
Query: 244 FTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGL 423
F +L R + LP+ +++ + + HQ +++ G+TG GK+TQ+PQ+ + +G
Sbjct: 157 FNKLAKLKRDQTNLPISQFRQQIVDAVKNHQVVIIAGDTGCGKSTQVPQYLLH----AGF 212
Query: 424 GKAKGVACTQPRRVAAMSVAQRVAEE 501
+ +ACTQPRR+A +S+A+RV E
Sbjct: 213 TE---IACTQPRRIACISLAKRVGFE 235
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +1
Query: 283 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
LP+ Y ++ + + + V+ G TGSGKTTQ+PQ+ ++ A + + TQPRR
Sbjct: 74 LPITSYHHEIVNTIENNSACVIFGPTGSGKTTQVPQYILDHYAKQ--RRYCNILVTQPRR 131
Query: 463 VAAMSVAQRVAEEMD 507
+AA+S+A+RV +E D
Sbjct: 132 IAAVSIAKRVCQERD 146
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEA--HERTLATD 686
LG +GY I + C T L Y+T G+LL++ +S + Q+ +++DE TL +D
Sbjct: 149 LGSLIGYQIGRDKCVSEDTRLAYVTTGVLLQKLISAKNMNQFTHVIIDEVVLMSATLESD 208
Query: 687 I 689
+
Sbjct: 209 L 209
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +3
Query: 576 KYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDILMGVL 704
+YMTDGMLLRE + +P + Y V+++DEAHERTL TDIL G++
Sbjct: 181 QYMTDGMLLREFLGEPDLASYSVMIIDEAHERTLHTDILFGLV 223
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 274 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVE 402
R LPV+ Y+ + + ++ HQ +++ GETGSGKTTQIPQ+ E
Sbjct: 126 RRSLPVYGYREELLEAISEHQVLIIEGETGSGKTTQIPQYLYE 168
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
LG VG+ +R E T L Y T G+LLR SD + +++DE HERT +D L
Sbjct: 52 LGDSVGFKVRLESKQSSSTRLLYCTTGILLRYFESDSTLAGVSHVVVDEVHERTEESDFL 111
Query: 693 MGVL 704
M VL
Sbjct: 112 MMVL 115
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 367 GKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEE 501
GKTTQIPQ+ ++ G + CTQPRR++AMSVA+RVA E
Sbjct: 3 GKTTQIPQFILDSYLEREKGAGCNIICTQPRRISAMSVAERVAAE 47
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 516 GQEVGYSIRFED-CSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
G VGY IR E + + Y T G+L R +SDP ++ +++DE HER L +D L
Sbjct: 47 GGSVGYQIRLESRLPRSRGSIIYCTTGVLQRWLVSDPFLKSTSHVIIDEIHERDLMSDFL 106
Query: 693 MGVL 704
+ ++
Sbjct: 107 LIII 110
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1
Query: 382 IPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEE 501
+ Q+ ++ A G G +ACTQPRR++A+SVA+RVA E
Sbjct: 1 VAQFILDDAIQCGNGSLCRIACTQPRRISAISVAERVAIE 40
>SB_36064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLL 575
LGQEVGY+IRFEDC+GP+T L
Sbjct: 15 LGQEVGYTIRFEDCTGPRTAL 35
>SB_31654| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 256
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +1
Query: 382 IPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEE 501
+PQ+ ++ +G G + TQPRR++A+SVA+RVA E
Sbjct: 1 VPQFVLDAFLENGQGAECNIVVTQPRRISAVSVAERVAAE 40
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 34.7 bits (76), Expect(2) = 0.023
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 564 QTLLKYMTDGMLLREAM-SDPMVEQYRVILLDEAHERTLATDILM 695
+TLL Y T+G+LLR M D + I++DE HER +D L+
Sbjct: 63 KTLLTYCTNGVLLRTLMQGDNSLSFITHIIVDEIHERDRFSDFLL 107
Score = 20.6 bits (41), Expect(2) = 0.023
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 504 GWALGQEVGYSIRFE 548
G +GQ GY IR E
Sbjct: 12 GERIGQTAGYQIRLE 26
>SB_27281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 477 CCSEGSRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGM 596
CC EGS++ G A+ + + I + DC LL ++ G+
Sbjct: 30 CCVEGSKKTGLAMDERLMRQILYADCELYMALLTFLKQGI 69
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 313 MRLLNTHQCIVLVGETGSGKT 375
MR N QCI++ GE+GSGKT
Sbjct: 101 MRDHNKDQCIIITGESGSGKT 121
>SB_13012| Best HMM Match : TrbC (HMM E-Value=1.4)
Length = 367
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/72 (23%), Positives = 26/72 (36%)
Frame = +3
Query: 456 KTSGCYVCCSEGSRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQ 635
K Y+CC G R +LG+ E P + Y D + A S +
Sbjct: 139 KIKALYICCDIGDRTQCLSLGEPSNVLACLETRGRPHEKVVYRPDTPVCAAASSSEFISS 198
Query: 636 YRVILLDEAHER 671
R+ + D+ R
Sbjct: 199 IRIWIRDDRGRR 210
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 516 GQEVGYSIRFEDCSGPQ 566
GQEVGY +RF DC P+
Sbjct: 15 GQEVGYCVRFNDCFDPK 31
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 310 FMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSG 420
FM+ QC+++ GE+G+GKT AAVSG
Sbjct: 90 FMKRELHDQCVIISGESGAGKTESTKLILQYLAAVSG 126
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 274 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKT 375
RLGL Y + + T+ CI G TG GKT
Sbjct: 40 RLGLDSCHYNSTCVNTYGTYHCICNPGYTGDGKT 73
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 313 MRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 441
M+ + CI++ GE+GSGKT AA++ L K K +
Sbjct: 89 MKRRSEDTCIMISGESGSGKTEASKIIMRYIAAITNLSKQKEI 131
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 340 IVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPR 459
+ ++G GSGKTT + + + G K++G C P+
Sbjct: 440 VAVIGAVGSGKTTLLSAILGQVSCTKGKIKSRGTICHVPQ 479
>SB_458| Best HMM Match : DUF19 (HMM E-Value=1.5)
Length = 518
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 543 FEDCSGPQTLLKYMT-DGMLLREAMSDPMVEQYRVILLDEAHERT 674
+E P L MT DG L +S+P+++ Y +L+DEA + T
Sbjct: 234 WERMCDPDDLEMRMTHDGYLKLYQLSNPVIDGYDCLLIDEAQDCT 278
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 322 LNTHQCIVLVGETGSGKTTQI 384
+N + ++LVGETG+GKT+ +
Sbjct: 444 INQQEPVLLVGETGTGKTSSV 464
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = +1
Query: 310 FMRLLNTH--QCIVLVGETGSGKT 375
F R+L QCIV+ GE+GSGKT
Sbjct: 223 FYRMLKEKKSQCIVISGESGSGKT 246
>SB_4502| Best HMM Match : SpoIIIAC (HMM E-Value=2.8)
Length = 82
Score = 26.2 bits (55), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +1
Query: 175 NYQYDYHHGYQY 210
N+++DYHH YQY
Sbjct: 47 NHRHDYHHLYQY 58
Score = 21.0 bits (42), Expect(2) = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 184 YDYHHGYQYT 213
Y+YHH +YT
Sbjct: 67 YNYHHNRKYT 76
>SB_40003| Best HMM Match : YTV (HMM E-Value=8.9)
Length = 128
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 221 NKYTGLPHSQRSMSYYENV*DSQSG 295
N TG+P+ + + YYEN+ +S++G
Sbjct: 68 NSETGVPYYEAGVPYYENMANSETG 92
>SB_13170| Best HMM Match : YTV (HMM E-Value=2.8)
Length = 281
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 221 NKYTGLPHSQRSMSYYENV*DSQSG 295
N TG+P+ + + YYEN+ +S++G
Sbjct: 161 NSETGVPYYETGVPYYENMANSETG 185
>SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)
Length = 1189
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 331 HQCIVLVGETGSGKTTQIPQWSVEFAAVSG 420
+QC+V+ GE+G+GKT AVSG
Sbjct: 918 NQCVVISGESGAGKTESTKFILQYLTAVSG 947
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 319 LLNTHQCIVLVGETGSGKT 375
++N H+ ++LVGETG+ KT
Sbjct: 520 MVNIHRPVLLVGETGTSKT 538
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 283 LPVWEYKNDFMRLLNTH--QCIVLVGETGSGKTT 378
L ++ K + +L T Q +VL+G +GSGKTT
Sbjct: 421 LAIYTDKTAYRNMLATRIDQSVVLMGSSGSGKTT 454
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,060,491
Number of Sequences: 59808
Number of extensions: 474919
Number of successful extensions: 1152
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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