Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120125.Seq
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 117 9e-27
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 117 9e-27
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 95 3e-20
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 95 3e-20
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 95 4e-20
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 95 4e-20
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 95 4e-20
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 95 4e-20
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 87 1e-17
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 70 1e-12
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 30 1.9
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 30 1.9
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 30 1.9
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 2.5
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 2.5
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 29 3.3
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 4.3
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 4.3
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 5.7
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 5.7
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 5.7
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 7.5
U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 28 7.5
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 117 bits (281), Expect = 9e-27
Identities = 59/83 (71%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Frame = +1
Query: 271 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG---- 438
KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+VEF G+ G
Sbjct: 72 KRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARL 131
Query: 439 VACTQPRRVAAMSVAQRVAEEMD 507
VACTQPRRVAAMSVA RVAEEMD
Sbjct: 132 VACTQPRRVAAMSVATRVAEEMD 154
Score = 107 bits (258), Expect = 6e-24
Identities = 47/64 (73%), Positives = 59/64 (92%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
LGQEVGYSIRFEDC +T+LKY TDGMLLREAM+ P++++Y+V++LDEAHERTLATDIL
Sbjct: 157 LGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDIL 216
Query: 693 MGVL 704
MG++
Sbjct: 217 MGLI 220
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 117 bits (281), Expect = 9e-27
Identities = 59/83 (71%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Frame = +1
Query: 271 KRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG---- 438
KR LPVWEYK FM LL +QCI LVGETGSGKTTQIPQW+VEF G+ G
Sbjct: 72 KRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARL 131
Query: 439 VACTQPRRVAAMSVAQRVAEEMD 507
VACTQPRRVAAMSVA RVAEEMD
Sbjct: 132 VACTQPRRVAAMSVATRVAEEMD 154
Score = 107 bits (258), Expect = 6e-24
Identities = 47/64 (73%), Positives = 59/64 (92%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
LGQEVGYSIRFEDC +T+LKY TDGMLLREAM+ P++++Y+V++LDEAHERTLATDIL
Sbjct: 157 LGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDIL 216
Query: 693 MGVL 704
MG++
Sbjct: 217 MGLI 220
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/67 (62%), Positives = 55/67 (82%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG +VGYSIRFEDC+ +T+LKYMTDGMLLRE +++P + Y V+++DEAHERTL T
Sbjct: 435 GCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHT 494
Query: 684 DILMGVL 704
DIL G++
Sbjct: 495 DILFGLV 501
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +1
Query: 274 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 453
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 454 PRRVAAMSVAQRVAEEM 504
PRRVAAMSVA RVA+E+
Sbjct: 418 PRRVAAMSVAARVADEV 434
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/67 (62%), Positives = 55/67 (82%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG +VGYSIRFEDC+ +T+LKYMTDGMLLRE +++P + Y V+++DEAHERTL T
Sbjct: 435 GCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHT 494
Query: 684 DILMGVL 704
DIL G++
Sbjct: 495 DILFGLV 501
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +1
Query: 274 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 453
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 454 PRRVAAMSVAQRVAEEM 504
PRRVAAMSVA RVA+E+
Sbjct: 418 PRRVAAMSVAARVADEV 434
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/67 (62%), Positives = 55/67 (82%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG +VGYSIRFEDC+ +T+LKYMTDGMLLRE +++P + Y V+++DEAHERTL T
Sbjct: 435 GCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHT 494
Query: 684 DILMGVL 704
DIL G++
Sbjct: 495 DILFGLV 501
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +1
Query: 274 RLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQ 453
R LPV+ +++ F+ + HQ +++ GETGSGKTTQ+PQ+ E G K + CTQ
Sbjct: 361 RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEG---GKRIGCTQ 417
Query: 454 PRRVAAMSVAQRVAEEM 504
PRRVAAMSVA RVA+E+
Sbjct: 418 PRRVAAMSVAARVADEV 434
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/67 (59%), Positives = 55/67 (82%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LGQ+VGY+IRFEDC+ +T++KYMTDG+LLRE + D ++QY I++DEAHER+L T
Sbjct: 511 GVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNT 570
Query: 684 DILMGVL 704
D+L G+L
Sbjct: 571 DVLFGLL 577
Score = 78.2 bits (184), Expect = 5e-15
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 238 SAFTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 417
S F + ++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E
Sbjct: 426 SDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----D 481
Query: 418 GLGKAKGVACTQPRRVAAMSVAQRVAEEM 504
G G + + CTQPRRVAAMSVA+RVA+EM
Sbjct: 482 GFGDSGLIGCTQPRRVAAMSVARRVADEM 510
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG +VGY+IRFEDC+ T++KYMTDGMLLRE + DP + Y +I+LDEAHERT+ T
Sbjct: 610 GCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHT 669
Query: 684 DILMGVL 704
D+L G+L
Sbjct: 670 DVLFGLL 676
Score = 84.6 bits (200), Expect = 6e-17
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +1
Query: 262 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 441
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 442 ACTQPRRVAAMSVAQRVAEE 501
CTQPRRVAAMSVA+RVAEE
Sbjct: 589 GCTQPRRVAAMSVAKRVAEE 608
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/67 (61%), Positives = 53/67 (79%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LG +VGY+IRFEDC+ T++KYMTDGMLLRE + DP + Y +I+LDEAHERT+ T
Sbjct: 610 GCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHT 669
Query: 684 DILMGVL 704
D+L G+L
Sbjct: 670 DVLFGLL 676
Score = 84.6 bits (200), Expect = 6e-17
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +1
Query: 262 LLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGV 441
++ +R LP++ K + M + +Q +V+VGETGSGKTTQ+ Q+++E +GLG+ +
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIE----AGLGRRGKI 588
Query: 442 ACTQPRRVAAMSVAQRVAEE 501
CTQPRRVAAMSVA+RVAEE
Sbjct: 589 GCTQPRRVAAMSVAKRVAEE 608
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/67 (59%), Positives = 55/67 (82%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G LGQ+VGY+IRFEDC+ +T++KYMTDG+LLRE + D ++QY I++DEAHER+L T
Sbjct: 511 GVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNT 570
Query: 684 DILMGVL 704
D+L G+L
Sbjct: 571 DVLFGLL 577
Score = 78.2 bits (184), Expect = 5e-15
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 238 SAFTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVS 417
S F + ++R LPV+ + M ++ + +++VGETGSGKTTQ+ Q+ +E
Sbjct: 426 SDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLE----D 481
Query: 418 GLGKAKGVACTQPRRVAAMSVAQRVAEEM 504
G G + + CTQPRRVAAMSVA+RVA+EM
Sbjct: 482 GFGDSGLIGCTQPRRVAAMSVARRVADEM 510
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 87.0 bits (206), Expect = 1e-17
Identities = 35/64 (54%), Positives = 53/64 (82%)
Frame = +3
Query: 513 LGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDIL 692
LG +VGY++RF+D S T +K+MTDG+LLRE ++DP++ +Y +I++DEAHER+ TDIL
Sbjct: 151 LGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDIL 210
Query: 693 MGVL 704
+G+L
Sbjct: 211 LGLL 214
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +1
Query: 268 RKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVAC 447
++R+ LP+++ + + + ++ I++VGETG GK+TQ+PQ+ +E + +
Sbjct: 72 QQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLE---AGWAADGRQIVI 128
Query: 448 TQPRRVAAMSVAQRVAEEMD 507
TQPRRVA +++A RVAEE D
Sbjct: 129 TQPRRVAVVTLATRVAEEKD 148
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 73.7 bits (173), Expect = 1e-13
Identities = 30/67 (44%), Positives = 52/67 (77%)
Frame = +3
Query: 504 GWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLAT 683
G +G VGY +RFE+ + +T ++YMTDG++LR+A+ P++++Y +++DEAHER+L +
Sbjct: 231 GTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHS 290
Query: 684 DILMGVL 704
D+LM +L
Sbjct: 291 DVLMCIL 297
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +1
Query: 283 LPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
LP+ + M L + + ++++GETGSGK+TQ+PQ V +G+ + +A TQPRR
Sbjct: 161 LPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVR----AGIANSGSIAVTQPRR 216
Query: 463 VAAMSVAQRVAEEM 504
VAA+S+A RVA EM
Sbjct: 217 VAAISLASRVATEM 230
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/63 (47%), Positives = 45/63 (71%)
Frame = +3
Query: 516 GQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDILM 695
G EV + IRFE +T L ++T+G+LLR+ D ++E+Y VI+LDE HER L +D+L+
Sbjct: 163 GSEVAFQIRFETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLI 222
Query: 696 GVL 704
G+L
Sbjct: 223 GLL 225
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/109 (34%), Positives = 64/109 (58%)
Frame = +1
Query: 175 NYQYDYHHGYQYTWTK*IYWSSAFTTFHELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVG 354
+++Y YH Q+ + F +L + + LP+ E + + LL T+Q +++ G
Sbjct: 62 HFEYAYHVALQFNQHQ------KFQKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAG 115
Query: 355 ETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEE 501
+TG GK+TQ+PQ+ ++ +G GVACTQPRR+A ++A+RVA E
Sbjct: 116 DTGCGKSTQVPQYLLK----AGF---TGVACTQPRRIACTALARRVAYE 157
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = +3
Query: 522 EVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHERTLATDILMGV 701
EV Y IR+E T + +MTDG+L++E D M+++Y VIL+DEAHER++ +D+L+G+
Sbjct: 311 EVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGM 370
Query: 702 L 704
L
Sbjct: 371 L 371
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/82 (42%), Positives = 53/82 (64%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
E+ + R LP++ + + +N + V+ GETGSGKTTQIPQ+ E A + G+ G
Sbjct: 228 EIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYE-AGYASEGELIG 286
Query: 439 VACTQPRRVAAMSVAQRVAEEM 504
+ T+PRRVAA+++AQRV E+
Sbjct: 287 I--TEPRRVAAIAMAQRVGVEL 306
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
EL + R LP +Y + ++ +++ +++ G TG GKTTQ+PQ+ ++ A + K
Sbjct: 173 ELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHEN--NKHVR 230
Query: 439 VACTQPRRVAAMSVAQRVAEE 501
V TQPRR+AA+S+A+RVA E
Sbjct: 231 VMVTQPRRIAAISIAERVARE 251
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSGPQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHER 671
+R G +G+ VGY +R + T+L Y T G+LLR SDP+ I++DE HER
Sbjct: 249 ARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPVASGITHIVMDEIHER 308
Query: 672 TLATDILM 695
+ TD L+
Sbjct: 309 EINTDYLL 316
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/81 (33%), Positives = 52/81 (64%)
Frame = +1
Query: 259 ELLRKRLGLPVWEYKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKG 438
++ +R LPV +Y+ + ++ + ++ ++ GETG GK+TQ+ Q+ +E + G +
Sbjct: 373 KITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFN 432
Query: 439 VACTQPRRVAAMSVAQRVAEE 501
+QPRR++A+S+A+RVA E
Sbjct: 433 AVVSQPRRISAISLAERVANE 453
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 492 SRRNGWALGQEVGYSIRFEDCSG-PQTLLKYMTDGMLLREAMSDPMVEQYRVILLDEAHE 668
+ G +G+ GY++RF+ + P + + T G+LLR M + + +++DE HE
Sbjct: 451 ANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGLRGISHVIIDEIHE 508
Query: 669 RTLATDILMGVL 704
R + TD ++ VL
Sbjct: 509 RDVDTDFVLIVL 520
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 298 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 429
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 91 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 132
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 298 YKNDFMRLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGK 429
Y+N M + N QC+++ GE+G+GKT + +SG G+
Sbjct: 29 YRN--MLIDNESQCVIISGESGAGKTVNAKFIMNYISRISGGGQ 70
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 331 HQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVAEEMDG 510
++ +++VGETG GKTT + V G GK + + C + R + R+ + DG
Sbjct: 1013 NEAVLMVGETGGGKTT--------LSEVVGRGKLRSINCHE--RTETADLLGRLRPKQDG 1062
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +1
Query: 316 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVA 495
++ N + ++LVG +GSGKT W V A+ +GVA + + V
Sbjct: 2151 QITNLNHGLMLVGSSGSGKTM---AWKVLLKALERWENVEGVAHVIDAKAMSKDSLYGVM 2207
Query: 496 EEMDGLWVRKLVTAFVLKTV 555
+ W L T+ + K +
Sbjct: 2208 DPNTREWTDGLFTSVIRKII 2227
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +1
Query: 316 RLLNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRRVAAMSVAQRVA 495
++ N + ++LVG +GSGKT W V A+ +GVA + + V
Sbjct: 2151 QITNLNHGLMLVGSSGSGKTM---AWKVLLKALERWENVEGVAHVIDAKAMSKDSLYGVM 2207
Query: 496 EEMDGLWVRKLVTAFVLKTV 555
+ W L T+ + K +
Sbjct: 2208 DPNTREWTDGLFTSVIRKII 2227
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 313 MRLLNTHQCIVLVGETGSGKT 375
M + +QC+V+ GE+GSGKT
Sbjct: 248 MLRIKENQCVVISGESGSGKT 268
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 510 ALGQEVGYSIRFEDCSGPQTLLKYMTDG 593
A+G+EVG ++ SGP ++KY +G
Sbjct: 493 AIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 510 ALGQEVGYSIRFEDCSGPQTLLKYMTDG 593
A+G+EVG ++ SGP ++KY +G
Sbjct: 493 AIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 510 ALGQEVGYSIRFEDCSGPQTLLKYMTDG 593
A+G+EVG ++ SGP ++KY +G
Sbjct: 493 AIGEEVGRVYAIDEDSGPNGIIKYSMEG 520
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 310 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 310 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 158 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 209
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 310 FMRLLNTH--QCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
+ +L H Q +++ GE+G+GKT + FAAV G + +G A P +
Sbjct: 161 YRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAV-GASQQEGGAEVDPNK 212
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 322 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 322 LNTHQCIVLVGETGSGKTTQIPQWSVEFAAVSGLGKAKGVACTQPRR 462
+N Q + +VG G+GK++ + E +SG G C P++
Sbjct: 685 VNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQ 731
>U39676-2|AAB37031.1| 143|Caenorhabditis elegans Hypothetical
protein C23F12.3 protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 564 VALNSLQNECCNQLPDPKPIHFF 496
+A N+ Q C NQLP P P+ F
Sbjct: 24 MAENNRQTRCANQLPPPAPVPDF 46
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 313 MRLLNTHQCIVLVGETGSGKT 375
MR + T Q I++ GE+G+GKT
Sbjct: 145 MRRIKTSQSIIVSGESGAGKT 165
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 334 QCIVLVGETGSGKTTQI 384
+CI LVG +GSGK+T I
Sbjct: 434 ECIALVGASGSGKSTVI 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,390,139
Number of Sequences: 27780
Number of extensions: 352572
Number of successful extensions: 963
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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