Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120122.Seq
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.73
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 29 0.96
SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces po... 28 1.7
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 2.9
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.9
SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces ... 26 5.1
SPBC32H8.08c |||mannosyltransferase complex subunit |Schizosacch... 26 6.8
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 25 9.0
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 25 9.0
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 9.0
SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce... 25 9.0
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.73
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 524 PLAAASLSRKHSSLSLPQRSINSSPTSHCCLIPHMSKSSLPTVSVFMDSST 372
PL++A+ + S+ S P S+NS+ T+ P S SS + + SST
Sbjct: 291 PLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSST 341
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 28.7 bits (61), Expect = 0.96
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 249 RCKGRGNHHRGDGLQRKRDYWLQGVL 326
RC N H+G G+ K D W GVL
Sbjct: 217 RCPEMINVHKGFGIDEKSDIWALGVL 242
>SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 295 ENVIIGYKGYYQAYAYNGGSLDPNTRVEESMKTL 396
ENVI +G + + +DPN +E +MKTL
Sbjct: 105 ENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTL 138
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -1
Query: 512 ASLSRKHSSLSLPQRSINSS--PTSHCCLIPHMSKSS-LPTVSVFMDSSTRVLGSSEP 348
+S S HSS S S +SS P+S I MS S+ + TV+V SS+ S P
Sbjct: 212 SSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSEVP 269
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 237 RPRKRCKGRGNHHRG 281
R +CKG+G HH+G
Sbjct: 145 RKHGKCKGKGKHHKG 159
>SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 267
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 401 TVSVFMDSSTRVLGSSEPPLYAYAW 327
T ++M+ ++ + G+S PP Y Y +
Sbjct: 194 TTPLYMERASYLFGASNPPAYTYTY 218
>SPBC32H8.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 598 RHDLLHVWYAK*LLFCRF 545
R+D LHVW LL C+F
Sbjct: 20 RYDTLHVWKLIKLLICKF 37
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 238 AQGNAAKDVEITIVETDYNENVIIGYKGYYQAYAYNGGS 354
++G A +D++ + DYN N+ I G+ ++Y G S
Sbjct: 130 SKGVAHRDLKPENILLDYNGNLKISDFGFASLFSYKGKS 168
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 627 SRLECHDDTDECQVYILDAEG 689
SR EC DD DE + DA+G
Sbjct: 274 SRCECLDDLDEPTHFAYDAQG 294
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 268 ITIVETDYNENVIIGYKGYYQAYAYNGGSLDPNTRVEESMKTL 396
+ + T YN+ IG GY + Y+ P+ ++ES+K L
Sbjct: 135 VRYIRTHYNDEFCIGVAGYPEGYS-------PDDDIDESIKHL 170
>SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 262 RPLQRFLGRGNVQVFNFVRT 203
R L+R RG VQ+FN VRT
Sbjct: 148 RELRRIARRGVVQLFNAVRT 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,123,979
Number of Sequences: 5004
Number of extensions: 63665
Number of successful extensions: 198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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