Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120122.Seq
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    27   0.84 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   3.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   5.9  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   7.8  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 404 AKKICSCGVSGSSARWAKS*STVGAVTAKSVFATTRPRPVGQRQRVGE 547
           AK   S G + S+     + +T    T  +   TT P PVG+  ++ E
Sbjct: 134 AKHDLSMGATTSTTSTTATTTTTTTTTTTTTTTTTTPNPVGESDQILE 181


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 333 VCVQRRLAGSQHTRRRIHENADCGQRRFAH-VGYQAAVRGGRRVNRP 470
           +C++  L G  H  R     A C     AH +G+    R  +R +RP
Sbjct: 530 LCIRCGLTG--HKARSCQNEAKCALCGGAHHIGHSECARSAQRCSRP 574


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 191 ARCSAPPQRQNAPPPKARIK 132
           AR S PP  + AP P+A +K
Sbjct: 104 ARPSQPPTTRFAPEPRAEVK 123


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 358 DPNTRVEESMKTLTVGKEDLLMWGIRQQCEVGEELIDRWGSDSEE 492
           DP + V + M+ L  G++  +     ++   GEE  D  G + EE
Sbjct: 443 DPESTVSKEMEALREGRQKKVQITFEEEIYKGEE--DYEGEEDEE 485


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -1

Query: 608 NAASP--RFVARVVRKVIVILPFHQLFAFDPLAAASLSRKHSSLSLPQRSINSSPTSHCC 435
           N  SP  + V  V +K+ + L   ++  +DP+A  +LS+ +    LP    N +     C
Sbjct: 6   NFVSPPSQSVILVAKKLGIKLNLRKINIYDPVAMDTLSKLNPHHILPMLVDNGTVVFEPC 65

Query: 434 LI 429
            I
Sbjct: 66  AI 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,583
Number of Sequences: 2352
Number of extensions: 16878
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)