Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120119.Seq
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 170 3e-41
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 167 3e-40
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 151 1e-35
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 140 3e-32
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 108 1e-22
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 90 5e-17
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 86 8e-16
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 85 1e-15
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 84 2e-15
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 82 1e-14
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 80 4e-14
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 80 5e-14
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 79 1e-13
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 78 2e-13
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 77 3e-13
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 77 4e-13
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 76 6e-13
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 73 8e-12
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 68 2e-10
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 67 3e-10
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 60 3e-08
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 46 0.001
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 44 0.004
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 42 0.010
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 40 0.039
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 40 0.052
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 40 0.069
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 39 0.091
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 37 0.48
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.48
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 36 1.1
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 36 1.1
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 35 2.0
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 34 3.4
UniRef50_Q6R7Z5 Cluster: Cathepsin B-like cysteine protease; n=8... 34 3.4
UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep: ... 34 3.4
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 4.5
UniRef50_A2G8K4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q4SFT0 Cluster: Chromosome 7 SCAF14601, whole genome sh... 33 6.0
UniRef50_Q1E6M0 Cluster: Threonyl-tRNA synthetase, cytoplasmic; ... 33 6.0
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 33 6.0
UniRef50_Q9PPZ6 Cluster: DNA primase; n=1; Ureaplasma parvum|Rep... 33 6.0
UniRef50_A1IRF2 Cluster: Putative uncharacterized protein; n=3; ... 33 7.9
UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong sub-... 33 7.9
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 170 bits (413), Expect = 3e-41
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKY 433
FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKY
Sbjct: 60 FGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKY 119
Query: 434 DPSIGIYGLDFYVVLGRPGFNVAHR 508
DPSIGIYGLDFYVVLGRPGF++A +
Sbjct: 120 DPSIGIYGLDFYVVLGRPGFSIADK 144
Score = 96.3 bits (229), Expect = 6e-19
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 102 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRS
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRS 59
Score = 57.2 bits (132), Expect = 3e-07
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +1
Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 609
F + ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 139 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 178
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 167 bits (405), Expect = 3e-40
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKY 433
FGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKY
Sbjct: 114 FGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKY 173
Query: 434 DPSIGIYGLDFYVVLGRPGFNVAHR 508
DPSIGIYGLDFYVVLGR GF++A +
Sbjct: 174 DPSIGIYGLDFYVVLGRSGFSIADK 198
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +1
Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 609
F + ++R+TG +G HR++KE+AM+WFQQKY GIIL K
Sbjct: 193 FSIADKKRRTGCIGAKHRISKEEAMRWFQQKYAGIILPGK 232
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 151 bits (367), Expect = 1e-35
Identities = 70/85 (82%), Positives = 75/85 (88%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKY 433
FGIRRNEKIAVH TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKY
Sbjct: 57 FGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKY 116
Query: 434 DPSIGIYGLDFYVVLGRPGFNVAHR 508
DPSIGI+G+DFYVV+ RPG V R
Sbjct: 117 DPSIGIFGMDFYVVMNRPGARVTRR 141
Score = 79.0 bits (186), Expect = 9e-14
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 99 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRT 56
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 496 RSTQRRKT-GKVGFPHRLTKEDAMKWFQQKYDGIILN 603
R T+R++ G VG H+ TKED + WF+QKYD +L+
Sbjct: 137 RVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLD 173
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 140 bits (339), Expect = 3e-32
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKY 433
FGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKY
Sbjct: 59 FGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKY 118
Query: 434 DPSIGIYGLDFYVVLGRPGFNVAHR 508
DPS GIYG+DFYVVL RPG+ VA R
Sbjct: 119 DPSTGIYGMDFYVVLERPGYRVARR 143
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +3
Query: 105 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRS
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRS 58
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +1
Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 603
++ + +RR +VG HR+TK+DAMKWFQ KY+G+ILN
Sbjct: 138 YRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILN 175
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 108 bits (260), Expect = 1e-22
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKY 433
FGIRRNEKI+V CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KY
Sbjct: 87 FGIRRNEKISVFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKY 146
Query: 434 DPSIGI--YGLDFYVVLGR 484
DP GI YGL VV R
Sbjct: 147 DPYTGIFRYGLLCCVVKTR 165
Score = 82.6 bits (195), Expect = 7e-15
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = +3
Query: 93 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
+ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRS
Sbjct: 33 ETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRS 86
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 89.8 bits (213), Expect = 5e-17
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
FGIRR E IAV T+RG +A E L++ L+ ++++ +F GN GFGI+EHI + G +
Sbjct: 81 FGIRRGENIAVMVTLRGQRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTR 140
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHR 508
YDP +GI+G+D + + RPG+ VA R
Sbjct: 141 YDPRVGIFGMDVILTIERPGYRVARR 166
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +3
Query: 126 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 251
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIR 79
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 85.8 bits (203), Expect = 8e-16
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
FGIR+ + IA T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+K
Sbjct: 52 FGIRKRQPIACKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMK 111
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEK 526
Y+P IGI+G++ V +PG+ +A R ++Q+K
Sbjct: 112 YNPDIGIFGMNVSVTFEKPGYRIAKRRIQQKK 143
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +3
Query: 105 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPV--FSK 233
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV FSK
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSK 46
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
F I++NE I T+RG +A++ LE L + + L R F + GN FGI+EH D G+K
Sbjct: 53 FSIKKNEPIGCKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMK 112
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEK 526
YDP+IG++G+D VV+ RPG + R + K
Sbjct: 113 YDPNIGVFGMDVTVVIKRPGERICKRRIATRK 144
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 105 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 248
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTL 50
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
F I++NE I T+RG +A+E L ++ E L R F + GN FGI+EH D G++
Sbjct: 53 FSIKKNEPIGCKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMR 112
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEK 526
YDP+IG++G+D VVL RPG + R + K
Sbjct: 113 YDPNIGVFGMDVTVVLKRPGERICKRRIATRK 144
Score = 37.1 bits (82), Expect = 0.37
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 105 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 248
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTL 50
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
FGIR+ E I + T+RG KA + L+ L V+E L R + G F FGI EHIDL G+
Sbjct: 64 FGIRKGEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSIGE-GYFAFGIAEHIDLPGVD 122
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEK 526
YDP +GI+G+D V L R G+ VA R ++ K
Sbjct: 123 YDPDVGIFGMDVCVSLKRRGYRVARRRRKKAK 154
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/52 (38%), Positives = 36/52 (69%)
Frame = +3
Query: 99 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKN 63
Score = 33.1 bits (72), Expect = 6.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQ 576
++ + +RRK K+ HR+TKED ++W +
Sbjct: 143 YRVARRRRKKAKIATSHRVTKEDTIRWLE 171
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
FG+R+ E IAV T+RG KA L+R L + ++ + GN FGI+EHI + G+K
Sbjct: 75 FGVRKGENIAVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVK 134
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEKWDFP 538
YDP +GI G+D + + RPG + R RQ + P
Sbjct: 135 YDPRVGILGMDVAITIQRPGHRIVERR-RQRRGHIP 169
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/51 (54%), Positives = 41/51 (80%)
Frame = +3
Query: 102 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRA 74
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
FG+R+ E I T+RG A + R + + +++ +F GNF FGI EHID+ GIK
Sbjct: 53 FGVRKGEPIGAAVTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIK 112
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHR 508
YDP IGI GLD + L RPG+ + R
Sbjct: 113 YDPGIGILGLDVCMTLSRPGYGIRKR 138
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
+G+R+ E I V T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+K
Sbjct: 57 WGVRKGEPIGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVK 116
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHR 508
Y+PSIGI GL V L RPG+ + R
Sbjct: 117 YEPSIGILGLGISVTLTRPGYGIRTR 142
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/51 (35%), Positives = 35/51 (68%)
Frame = +3
Query: 99 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 251
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQR 55
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
FGIRR E I + T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +
Sbjct: 80 FGIRRGEPIGLLVTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSR 138
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHR 508
YDP++GI+G D V L RPGF V +R
Sbjct: 139 YDPALGIFGFDVAVTLARPGFRVQYR 164
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/47 (38%), Positives = 33/47 (70%)
Frame = +3
Query: 111 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 251
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIK 78
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGL---KVREYELRRDNFSATGNFGFGIQEHIDL- 421
FGIR+ I + T+RG KAEE L+ K L +F GNF FG+ EHID
Sbjct: 60 FGIRKKLPIGLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFP 119
Query: 422 GIKYDPSIGIYGLDFYVVLGRPGFNVAHRGVRQ 520
G KYDPS+GIYG+D V + G+ V R V++
Sbjct: 120 GQKYDPSVGIYGMDICVTFEKSGYRVKSRKVKR 152
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 102 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYT 245
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQT 56
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/79 (40%), Positives = 55/79 (69%)
Frame = -1
Query: 490 TWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFC 311
TW +V++ ++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF
Sbjct: 44 TWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFS 103
Query: 310 FSSSDCTMDSNLFITTDTK 254
+++ +DSNLF+++DT+
Sbjct: 104 LWTTNSNVDSNLFVSSDTE 122
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -3
Query: 242 IPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 111
+ SLG L+ +L Q+LG + Q VT FTN +Q + D++ H
Sbjct: 127 VSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTH 170
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 76.2 bits (179), Expect = 6e-13
Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
F IR + I T+R AEE L+ L + E L F TGNF FG++EH + +
Sbjct: 62 FDIREGDPIGAKVTLRDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQE 119
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHR 508
YDPSIGIYGLD V L RPG+ VA R
Sbjct: 120 YDPSIGIYGLDVTVNLVRPGYRVAKR 145
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 111 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 248
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTV 59
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 IRRNEKIAVHCTVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKY 433
IR I V T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KY
Sbjct: 55 IRPGLPIGVKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKY 113
Query: 434 DPSIGIYGLDFYVVLGRPGFNVAHRGVRQEK 526
DP +G+ GL+ YV L RPG+ V R +++ K
Sbjct: 114 DPELGLIGLEAYVTLERPGYRVERRRIKRSK 144
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +3
Query: 111 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTV 248
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRV 50
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKY 433
F IRR E I+ C++ K L + LK++ + + NFS T FG GI +H++LG +
Sbjct: 49 FSIRRGEYISCFCSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNF 108
Query: 434 DPSIGIYGLDFYVVLGRPGFNV 499
D IGI+G++ L R G+ +
Sbjct: 109 DQKIGIHGINIIGDLSRRGYRI 130
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/92 (43%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 257 GIRRNEKIAVHCTVRGA-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-K 430
G R I T+R A K + L+ VRE L NF +GN FGI ++ D K
Sbjct: 50 GTRLGAPIGCKVTIRDADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQK 109
Query: 431 YDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEK 526
YDP IGIYG+D VVL RPG V+ R R K
Sbjct: 110 YDPDIGIYGMDVNVVLERPGHRVSRRRRRGVK 141
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +3
Query: 126 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSL 257
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R L
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDL 49
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIK 430
F IR+ I V T+R A L+ ++Y++ +F GN FGI ++ D G+K
Sbjct: 57 FNIRKGLNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMK 116
Query: 431 YDPSIGIYGLDFYVVL-GRPGFNVAHRGVRQ 520
YDP IGI+G+D +V R G+ + R +++
Sbjct: 117 YDPDIGIFGMDIAIVFRRRGGYRIEKRRIKK 147
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +3
Query: 93 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVR 251
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVR 55
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = -1
Query: 478 KYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFF-CFSS 302
++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F + L++
Sbjct: 77 QHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHLEPALQNLHRLVPV 136
Query: 301 SDCTMDSNLFITTDTK 254
++ + +LF+T + +
Sbjct: 137 TNGDVRGDLFVTANAE 152
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3
Query: 257 QRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTYVQAKLSDMKIPH 111
+R H + LG+ RLL+ +LLQHL + +T N V+ +L + PH
Sbjct: 152 ERAHGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPH 200
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 43.6 bits (98), Expect = 0.004
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +1
Query: 532 FPHRLTKEDAMKWFQQKYDGII 597
F HR+TK+DAMKWFQ KY+G+I
Sbjct: 27 FQHRVTKDDAMKWFQVKYEGVI 48
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 42.3 bits (95), Expect = 0.010
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Frame = +2
Query: 248 AVFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 409
A F R+ + T+RG K E L+R + +++++ L F GN+ FGI+E
Sbjct: 76 ANFKTRKGTNAGLKVTLRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKE 135
Query: 410 HIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRGVRQEKWDFP 538
HI + +D I GLD VV+ N H EK +FP
Sbjct: 136 HIIFPEVNFDRIDKIRGLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 40.3 bits (90), Expect = 0.039
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 266 RNEKIAVHCTVRGAKAEEILERGLKVREYEL 358
R KIA + TV+G KA +LE GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 39.9 bits (89), Expect = 0.052
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Frame = +2
Query: 248 AVFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 409
A F +R + V T+RG K +R + +V+++ + R+ F GN+ FG+QE
Sbjct: 74 AGFKVREGMPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQE 133
Query: 410 HIDL-GIKYDPSIGIYGLDFYVV 475
+ + YD + I+G++ VV
Sbjct: 134 QLIFPEVSYDSVMQIHGMNITVV 156
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 39.5 bits (88), Expect = 0.069
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +2
Query: 248 AVFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 409
A F +R + I H T+RG + E +R L ++R++ L + F GN+ FG+ E
Sbjct: 84 AQFKLREGQPIGCHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSE 143
Query: 410 HI-DLGIKYDPSIGIYGLDFYVV 475
+ L I D + I G+D V
Sbjct: 144 QVMFLEIDQDKIVRIRGMDITFV 166
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 39.1 bits (87), Expect = 0.091
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -1
Query: 478 KYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKD 320
K V+V +I+++ +VLD ++NVF + E +++ GGE QF D + L D
Sbjct: 76 KDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDAEAALDD 128
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 36.7 bits (81), Expect = 0.48
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 102 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTV 248
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNV 73
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.48
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +2
Query: 317 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 481
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +3
Query: 105 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTV 248
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSI 74
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +3
Query: 102 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ S
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIAS 76
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 96 NSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTV 248
N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++
Sbjct: 25 NYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSI 78
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +2
Query: 254 FGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI 415
F IR+ I + T+RGA+ L + + KVR++ L ++F GN+ FG+ E +
Sbjct: 81 FKIRKGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQL 140
Query: 416 DL-GIKYDPSIGIYGLDFYVV 475
+ D I G+D +V
Sbjct: 141 VFPELNPDEVRRIQGMDITIV 161
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 102 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 254
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ S
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISS 70
>UniRef50_Q6R7Z5 Cluster: Cathepsin B-like cysteine protease; n=8;
Trypanosoma|Rep: Cathepsin B-like cysteine protease -
Trypanosoma brucei
Length = 340
Score = 33.9 bits (74), Expect = 3.4
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Frame = +3
Query: 120 LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARY-TVRSLVSVVMK-RLLSIV 293
+H+ + C+ C+ + AA V E PV SKA V L + K + ++
Sbjct: 1 MHLMRACITFCIASTAVVAVNAALVAE----DAPVLSKAFVDRVNRLNRGIWKAKYDGVM 56
Query: 294 QSEELKQKKSLRGV*KSENMNCGV------TTSPPRVILASVFKNTLTWVS-STIPQL 446
Q+ L++ K L GV K N N + T R L S F + W + TIPQ+
Sbjct: 57 QNITLREAKRLNGVIKKNN-NASILPKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQI 113
>UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep:
Serine protease - Bombyx mori (Silk moth)
Length = 392
Score = 33.9 bits (74), Expect = 3.4
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 266 RNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFG-IQEHIDLGI-KYDP 439
R+ A HCT R KAEE+ R + EY+++R N+S T NF I++H I Y
Sbjct: 193 RHVLTAAHCTRRW-KAEELFVR---LGEYDMKRTNYSRTYNFKVSEIRQHEAFQIANYKN 248
Query: 440 SIGIYGLD 463
I I L+
Sbjct: 249 DIAILKLE 256
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 33.5 bits (73), Expect = 4.5
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 176 DSCRQGVGATHRTTACIFQG*VYSAVFGIRRNEKIAVHCT-VRGAKAEEILERGLKVREY 352
D + +GAT++ I Y + F I + A+ T + +E+ +R +R +
Sbjct: 153 DDASRAMGATYKGKL-IGNLDSYMSCFQINPQVQHAIASTGIILTNDDEMAKRARLIRNH 211
Query: 353 ELRRDNFSATGNFGFGIQEHIDLGIKYD 436
+ D+F GN G+ + + +D+G KYD
Sbjct: 212 AIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_A2G8K4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 573
Score = 33.5 bits (73), Expect = 4.5
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = -1
Query: 343 DFQTP--LKDFFCFSSSD---CTMDSNLFITTDTKDRTVYLALENTGCCPVSCSNTLAAR 179
D QT L+ F CF S C D L T +D +Y +TG PVS T+ A
Sbjct: 450 DIQTEELLERFTCFESGVRDICLYDDTLLAAT--QDGHIYKLAPSTGTKPVSSIKTMEAN 507
Query: 178 -VSLSPD 161
+SLSPD
Sbjct: 508 TISLSPD 514
>UniRef50_Q4SFT0 Cluster: Chromosome 7 SCAF14601, whole genome
shotgun sequence; n=8; Euteleostei|Rep: Chromosome 7
SCAF14601, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 762
Score = 33.1 bits (72), Expect = 6.0
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -1
Query: 427 DTQVNVFLNTEAKITRGGEV-VTPQFIFSDFQTPLKDFFCFSSSDCTMDSNLFITTDTKD 251
D + L+ E T ++ VT FI + QTP +D CT DS + + +
Sbjct: 646 DECIRYALDAEGIKTTNPKIPVTDNFICTGGQTPFRDHIA-----CTGDSGGAVFKNYEH 700
Query: 250 RTVYLALENTGCCPVSCSNTLAARVSLSPDSPTHMFK 140
RTV +AL + G + S L V S D ++FK
Sbjct: 701 RTVQVALVSWGTKSLCKSGELKESVKNSRDFHLNLFK 737
>UniRef50_Q1E6M0 Cluster: Threonyl-tRNA synthetase, cytoplasmic;
n=4; cellular organisms|Rep: Threonyl-tRNA synthetase,
cytoplasmic - Coccidioides immitis
Length = 757
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -1
Query: 541 GGEIPLFLSYASVCYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVT 362
GG+ P +LS + V PA YD + G L+ ++V NT K R G++
Sbjct: 642 GGKWPFWLSPRQILIVPVMPAVYDYVEELQGILRGDKLNVDIDVSGNTLQKKIRNGQLAQ 701
Query: 361 PQFIF 347
FIF
Sbjct: 702 YNFIF 706
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +2
Query: 248 AVFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 409
A F IR+ + V T+RG L+R + ++++++ L +F GNF FGI+E
Sbjct: 76 AGFQIRKKMPVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIRE 135
Query: 410 HIDL-GIKYDPSIGIYGLDFYVV 475
+ I YD I G++ ++
Sbjct: 136 QLIFPEIHYDKIDKIRGMNISII 158
>UniRef50_Q9PPZ6 Cluster: DNA primase; n=1; Ureaplasma parvum|Rep:
DNA primase - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 641
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 225 FSKARYTVR-SLVSVVMKRLLSIVQSEELKQKKSLRGV*KSENMNCGVTTSPPRVILASV 401
F K +++ +L+ V++ LL Q ++ KK+++ K + +TTS P+VIL +
Sbjct: 420 FMKQTFSIEENLLKKVIEELLINKQCNSIQNKKNIQSYQKQTQLTNKLTTSNPKVILTKI 479
Query: 402 FKN 410
K+
Sbjct: 480 DKH 482
>UniRef50_A1IRF2 Cluster: Putative uncharacterized protein; n=3;
Neisseria meningitidis|Rep: Putative uncharacterized
protein - Neisseria meningitidis serogroup A
Length = 457
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/67 (26%), Positives = 38/67 (56%)
Frame = +3
Query: 162 SGDRLTRAAKVLEQLTGQQPVFSKARYTVRSLVSVVMKRLLSIVQSEELKQKKSLRGV*K 341
+G+ L RA K++EQ+ QQ +K ++++ + ++ + +L V+ +E +QK+ G
Sbjct: 321 NGNGLKRA-KIVEQIHNQQNNRNKQQHSLTFQIKLLFQMMLDGVEKDEFEQKRRFAGKDD 379
Query: 342 SENMNCG 362
+ N G
Sbjct: 380 AVNQMLG 386
>UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong
sub-class; n=2; Oryza sativa|Rep: Transposon protein,
putative, Pong sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 596
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 272 EKIAVHCTVRGAKAEEILERGLK 340
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,547,653
Number of Sequences: 1657284
Number of extensions: 12905800
Number of successful extensions: 34279
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 33095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34255
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -