Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120119.Seq
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 229  ENTGCCPVSCSNTLAARVSLSPDSP 155
            ENT C P + S    +   + PD P
Sbjct: 2280 ENTECHPDASSTMAPSTTPMVPDKP 2304


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 392 QNYPWRRSCHAA 357
           Q YPW R  H A
Sbjct: 209 QIYPWMRKVHVA 220


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 392 QNYPWRRSCHAA 357
           Q YPW R  H A
Sbjct: 209 QIYPWMRKVHVA 220


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQQK 582
           F +   RR+  ++    RLT+     WFQ +
Sbjct: 204 FNKYLTRRRRIEIAESLRLTERQIKIWFQNR 234


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = -1

Query: 325 KDFFCFSSSDCTMDSNLFITTDTKDRTVYLALENTGCCPVSC 200
           K+ FC    DC  +S+    T   D    L  + T C    C
Sbjct: 124 KELFCNGKPDCKDESDENSCTVETDPNRALDCDPTQCVLPDC 165


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +2

Query: 443 IGIYGLDFYVVLGRPGFNVAHRGVRQEKWDFPTASQRKML 562
           +G   L F  V+G   F +  R     K D  T    KML
Sbjct: 446 LGPLKLSFQGVIGEGAFGIVRRAFLDLKEDNKTQVAVKML 485


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQQK 582
           F +   RR+  ++    RLT+     WFQ +
Sbjct: 204 FNKYLTRRRRIEIAESLRLTERQIKIWFQNR 234


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 392 QNYPWRRSCHAA 357
           Q YPW R  H A
Sbjct: 209 QIYPWMRKVHVA 220


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 490 FQRSTQRRKTGKVGFPHRLTKEDAMKWFQQK 582
           F +   RR+  ++    RLT+     WFQ +
Sbjct: 204 FNKYLTRRRRIEIAESLRLTERQIKIWFQNR 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,080
Number of Sequences: 336
Number of extensions: 3477
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)