Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120119.Seq
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    27   0.21 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    27   0.21 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +2

Query: 260 IRRNEKIAVHCTVRGAKAEEILER---GLKVREY-ELRRDNFSATGNFGFGIQEHI 415
           + RN+ +A+HC  +G     I+ +   G K  EY ELR   ++   + G  + +H+
Sbjct: 721 VERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHV 776


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +2

Query: 260 IRRNEKIAVHCTVRGAKAEEILER---GLKVREY-ELRRDNFSATGNFGFGIQEHI 415
           + RN+ +A+HC  +G     I+ +   G K  EY ELR   ++   + G  + +H+
Sbjct: 717 VERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHV 772


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 47  WYTRHDYNFSKK 12
           WY  HDYN   K
Sbjct: 208 WYLNHDYNLENK 219


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 47  WYTRHDYNFSKK 12
           WY  HDYN   K
Sbjct: 208 WYLNHDYNLENK 219


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 311 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 406
           AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 386 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 417


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 311 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 406
           AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 301 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 332


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 311 AEEILERGLKVREYELRRDNFSATGNFGFGIQ 406
           AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 620 AEERRVQGVTKPRYMVWRETISSTATLGFRVE 651


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 357 CGVTTSPPRVILASVFKN 410
           C +   PPRVIL+S  K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 357 CGVTTSPPRVILASVFKN 410
           C +   PPRVIL+S  K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 357 CGVTTSPPRVILASVFKN 410
           C +   PPRVIL+S  K+
Sbjct: 626 CNLGLEPPRVILSSGAKS 643


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,886
Number of Sequences: 438
Number of extensions: 4090
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)