Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120117.Seq
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   1.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   2.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   2.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   6.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   6.5  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   6.5  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 38  FVHLSKQKQTQDKMCDRKAVIKNADMSEEMQQD--AVDCATQALEKFNIEKDIA-AFIKK 208
           F+ + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + 
Sbjct: 68  FIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRA 127

Query: 209 EFDKKYN 229
           +F++  N
Sbjct: 128 KFEELNN 134


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 223 IQSYLALHRGSNFGSYVTHETRHFIY 300
           + S+L L RGS+    V    + F Y
Sbjct: 342 VPSFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 223 IQSYLALHRGSNFGSYVTHETRHFIY 300
           + S+L L RGS+    V    + F Y
Sbjct: 342 VPSFLKLQRGSDISKLVAKNIKEFYY 367


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 617 PGACGVCLYCVSYN 658
           P  C +  YC++YN
Sbjct: 431 PDDCSIFYYCLAYN 444



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 557 LFNRKFTMLDINCVLPLHLVPGACGV 634
           L N KFT+ DI+  L  HL+    G+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFVGL 59


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 563 NRKFTMLDINCVLPLHLVPGACGV 634
           N KFT LD++  L  HL+    G+
Sbjct: 37  NGKFTALDVDPTLCTHLLYAFVGL 60


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 223 IQSYLALHRGSNFGSYVTHETRHFIY 300
           + ++L L RGS+    V    + F Y
Sbjct: 342 VPNFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 223 IQSYLALHRGSNFGSYVTHETRHFIY 300
           + ++L L RGS+    V    + F Y
Sbjct: 342 VPNFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 223 IQSYLALHRGSNFGSYVTHETRHFIY 300
           + ++L L RGS+    V    + F Y
Sbjct: 341 VPNFLKLQRGSDISKLVAKNIKEFYY 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,715
Number of Sequences: 336
Number of extensions: 3679
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)