Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120117.Seq
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    24   6.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.2  

>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 113 MSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEF 214
           + ++MQ  A  C T  LE+ N E    A ++ ++
Sbjct: 262 LDQDMQDKARKCVTDVLERHNGELTYEAAMEMDY 295


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = +2

Query: 287 ATSSTSTWDRWLYCSLRAVRPFSITSIFLLAADAVLSDG*PLQILMRGSGCGTFP*VASS 466
           A +S   + RW  CS+R      ++ +  +A D +L      Q +++ +  GT P   +S
Sbjct: 318 AKTSLPGYSRWRTCSVREKDTAFVSELLGIATD-ILGKALRQQTVLQRTPSGTEPKTPTS 376

Query: 467 QSVAGG 484
            +   G
Sbjct: 377 PTGPSG 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,180
Number of Sequences: 2352
Number of extensions: 15167
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)