Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120117.Seq
         (792 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein lig...   126   5e-29
AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p pro...   126   5e-29
AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,...   126   5e-29
AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,...   126   5e-29
U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein lig...   124   1e-28
U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein lig...   124   1e-28
U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic dy...   124   1e-28
AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,...   124   1e-28
AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,...   124   1e-28
AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,...   124   1e-28
AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,...   124   1e-28
AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA...    49   6e-06
AY069474-1|AAL39619.1|  652|Drosophila melanogaster LD21421p pro...    29   7.3  
AE013599-2251|AAF58014.2|  652|Drosophila melanogaster CG4282-PA...    29   7.3  

>U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/59 (96%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p
           protein.
          Length = 89

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/59 (96%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,
           isoform B protein.
          Length = 89

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/59 (96%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,
           isoform A protein.
          Length = 89

 Score =  126 bits (303), Expect = 5e-29
 Identities = 57/59 (96%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAAFIKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic
           dynein light chain 1 protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,
           isoform D protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,
           isoform C protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,
           isoform B protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,
           isoform A protein.
          Length = 89

 Score =  124 bits (300), Expect = 1e-28
 Identities = 56/59 (94%), Positives = 58/59 (98%)
 Frame = +2

Query: 77  MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVG 253
           M DRKAVIKNADMSEEMQQDAVDCATQALEK+NIEKDIAA+IKKEFDKKYNPTWHCIVG
Sbjct: 1   MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVG 59



 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +1

Query: 250 GSNFGSYVTHETRHFIYFYLGQVAILLFKSG 342
           G NFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 59  GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89


>AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA
           protein.
          Length = 104

 Score = 49.2 bits (112), Expect = 6e-06
 Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 59  KQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAA-FIKKEFDKKYNPT 235
           K+ + K+     ++K+ DM+EEM+ +A++ +  A EK++   + AA  IK+  DKK+   
Sbjct: 8   KEGEKKIVHVYPLVKHTDMNEEMRIEAIELSITACEKYSSNYEHAAKIIKENMDKKFGIY 67

Query: 236 WHCIVG 253
           WH +VG
Sbjct: 68  WHVVVG 73



 Score = 30.7 bits (66), Expect = 2.4
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +1

Query: 196 IYQERI*QEIQSYLALHRGSNFGSYVTHETRHFIY-FYLGQVAILLFK 336
           I +E + ++   Y  +  G  FG  V++ET + +Y F+ G +AI+L+K
Sbjct: 55  IIKENMDKKFGIYWHVVVGEGFGFEVSYETENILYLFFAGNLAIVLWK 102


>AY069474-1|AAL39619.1|  652|Drosophila melanogaster LD21421p
           protein.
          Length = 652

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 354 LNGLTALKEQYSHLSQVEVDEVASLVCHIRAKIRP 250
           L G+T LK+   H+  + V+      CHI AK+ P
Sbjct: 518 LKGMTGLKQ---HMKSIHVESAGEHRCHICAKVSP 549


>AE013599-2251|AAF58014.2|  652|Drosophila melanogaster CG4282-PA
           protein.
          Length = 652

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 354 LNGLTALKEQYSHLSQVEVDEVASLVCHIRAKIRP 250
           L G+T LK+   H+  + V+      CHI AK+ P
Sbjct: 518 LKGMTGLKQ---HMKSIHVESAGEHRCHICAKVSP 549


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,762,357
Number of Sequences: 53049
Number of extensions: 666584
Number of successful extensions: 1668
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)