Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120115.Seq
(755 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 128 1e-28
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 125 1e-27
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 124 2e-27
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 122 1e-26
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 120 3e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 120 3e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 120 4e-26
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 120 5e-26
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 116 5e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 116 8e-25
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 113 3e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 113 4e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 112 1e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 109 5e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 109 7e-23
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 107 3e-22
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 102 1e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 99 6e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 99 1e-19
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 99 1e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 98 2e-19
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 95 2e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 3e-18
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 94 4e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 93 7e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 2e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 89 8e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 87 4e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 84 4e-15
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 83 5e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 7e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 83 9e-15
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 82 1e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 82 2e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 81 4e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 1e-13
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 77 4e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 77 6e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 76 8e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 1e-12
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 75 2e-12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 75 3e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 3e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 74 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 4e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 4e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 6e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 8e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 73 1e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 1e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 3e-11
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 71 4e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 4e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 4e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 70 7e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 70 7e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 70 7e-11
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 68 3e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 67 5e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 66 7e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 66 7e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 7e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 65 2e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 2e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 65 2e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 65 2e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 65 2e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 65 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 3e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 64 4e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 5e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 6e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 63 8e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 62 1e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 62 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 3e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 61 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 4e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 6e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 59 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 55 2e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 55 2e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 54 4e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 54 4e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 54 5e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 53 7e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 53 9e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 51 4e-05
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 50 5e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 47 6e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 45 0.002
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 43 0.009
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.15
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.62
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 37 0.62
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 1.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 4.4
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 5.8
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 128 bits (310), Expect = 1e-28
Identities = 60/79 (75%), Positives = 66/79 (83%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGH
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGH 243
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILILPGFGIISHI+S
Sbjct: 244 PEVYILILPGFGIISHIVS 262
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 431 ISS 439
+SS
Sbjct: 158 VSS 160
Score = 59.7 bits (138), Expect = 8e-08
Identities = 36/100 (36%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GNDQIYNTIVTAHAXXXXXXX 176
HKDIGTLY EL PG I GN Q+YN ++TAHA
Sbjct: 13 HKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFM 72
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N VP+++GAPD+AFP F PP L
Sbjct: 73 VMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 125 bits (301), Expect = 1e-27
Identities = 56/79 (70%), Positives = 65/79 (82%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGH
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGH 240
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILI+PGFG++SHI+S
Sbjct: 241 PEVYILIIPGFGMVSHIVS 259
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 431 ISS 439
ISS
Sbjct: 155 ISS 157
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/99 (36%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L G+ Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 124 bits (300), Expect = 2e-27
Identities = 58/79 (73%), Positives = 65/79 (82%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
IPLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGH
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGH 248
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILILPGFG+ISHI+S
Sbjct: 249 PEVYILILPGFGMISHIVS 267
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 431 ISS 439
SS
Sbjct: 163 ASS 165
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXX 176
HKDIGTLY EL P + L+GN QIYN ++TAHA
Sbjct: 18 HKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFM 77
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++G+PD+AFP F PP L
Sbjct: 78 VMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 122 bits (294), Expect = 1e-26
Identities = 57/78 (73%), Positives = 63/78 (80%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 690
PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 691 EVYILILPGFGIISHIIS 744
EVYILILPGFGIISH+++
Sbjct: 242 EVYILILPGFGIISHVVA 259
Score = 72.9 bits (171), Expect = 8e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AEL PG+L+G+DQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 72 PILIGGFGNWLVPLMIGAPDMAFP 95
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 431 ISS 439
+SS
Sbjct: 155 VSS 157
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 120 bits (290), Expect = 3e-26
Identities = 58/79 (73%), Positives = 63/79 (79%)
Frame = +1
Query: 514 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 693
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 694 VYILILPGFGIISHIISQE 750
VYILILPGFGIISH+I E
Sbjct: 227 VYILILPGFGIISHMIFNE 245
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3
Query: 87 ELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
ELG PGSLIGNDQIYN+IVT+HA N L+PL+LG+PD++FP
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFP 79
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 431 ISS 439
SS
Sbjct: 139 ASS 141
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 120 bits (290), Expect = 3e-26
Identities = 57/78 (73%), Positives = 63/78 (80%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 690
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 691 EVYILILPGFGIISHIIS 744
EVYILILPGFG+ISHI++
Sbjct: 242 EVYILILPGFGMISHIVT 259
Score = 76.2 bits (179), Expect = 8e-13
Identities = 43/98 (43%), Positives = 48/98 (48%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AELG PG+L+GND IYN IVTAHA
Sbjct: 12 HKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVM 71
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVPL++GAPD+AFP F PP L
Sbjct: 72 PIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 431 ISS 439
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 120 bits (289), Expect = 4e-26
Identities = 56/78 (71%), Positives = 63/78 (80%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 690
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Query: 691 EVYILILPGFGIISHIIS 744
EVYILILPGFG+ISH+++
Sbjct: 243 EVYILILPGFGMISHVVT 260
Score = 76.2 bits (179), Expect = 8e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AELG PG+L+G+DQIYN IVTAHA
Sbjct: 13 HKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFP 96
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 120 bits (288), Expect = 5e-26
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 690
PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 691 EVYILILPGFGIISHIIS 744
EVYILILPGFG+ISH+++
Sbjct: 242 EVYILILPGFGMISHVVT 259
Score = 72.9 bits (171), Expect = 8e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AEL PG+L+G+DQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 72 PVMIGGFGNWLVPLMIGAPDMAFP 95
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 431 ISS 439
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 116 bits (280), Expect = 5e-25
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILILPGFG++SHII+
Sbjct: 245 PEVYILILPGFGLVSHIIA 263
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/63 (50%), Positives = 34/63 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 431 ISS 439
I S
Sbjct: 159 IGS 161
Score = 41.5 bits (93), Expect = 0.022
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXX 176
HK IG LY EL PG L G YN I T H
Sbjct: 14 HKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVV 73
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFP 254
N VP+++GAPD++FP
Sbjct: 74 VMPILFGGFGNYFVPILIGAPDMSFP 99
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 116 bits (278), Expect = 8e-25
Identities = 51/79 (64%), Positives = 63/79 (79%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGH
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGH 346
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYI+ILP FG+ISHI++
Sbjct: 347 PEVYIVILPAFGVISHIVA 365
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 431 ISS 439
SS
Sbjct: 261 ASS 263
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 AELGNPGSLIGNDQ--IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
A LG L GN ++N ++T H N +PL++GAPD+AFP
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 113 bits (273), Expect = 3e-24
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGH
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGH 241
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILI+PGFGIISH++S
Sbjct: 242 PEVYILIIPGFGIISHVVS 260
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PGS L GN Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GA D AFP
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFP 96
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 113 bits (272), Expect = 4e-24
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGH
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGH 241
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILI+PGFGI+SHI+S
Sbjct: 242 PEVYILIIPGFGIVSHIVS 260
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.022
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI +Y EL PGS L GN Q++N +V HA
Sbjct: 12 KDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLA 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL++GA D++FP
Sbjct: 72 MPALIGGFGNYMLPLMIGATDMSFP 96
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 112 bits (269), Expect = 1e-23
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGH
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGH 283
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYI+ILPGFGIIS I+S
Sbjct: 284 PEVYIMILPGFGIISQIVS 302
Score = 50.0 bits (114), Expect = 6e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 418
PR+NNI F V NGAGTG TVY PLS++ G +VD+AI SL
Sbjct: 135 PRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSL 193
Query: 419 HLAGISS 439
H+AG SS
Sbjct: 194 HIAGASS 200
Score = 36.3 bits (80), Expect = 0.82
Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 16/100 (16%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGN-------------DQIY---N 134
HKDIGTLY AEL PG DQ Y N
Sbjct: 36 HKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWN 95
Query: 135 TIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
++TAH N VP+++GAPD+AFP
Sbjct: 96 VLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFP 135
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 109 bits (263), Expect = 5e-23
Identities = 52/67 (77%), Positives = 55/67 (82%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGH
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 213
Query: 688 PEVYILI 708
PEVYILI
Sbjct: 214 PEVYILI 220
Score = 87.8 bits (208), Expect = 3e-16
Identities = 48/88 (54%), Positives = 50/88 (56%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 431 ISSXXXXXXXXXXXXXXXXXXXSFDQYP 514
ISS SFDQ P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/70 (52%), Positives = 41/70 (58%)
Frame = +3
Query: 87 ELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE*II 266
ELG PGSLIG+DQIYNTIVTAHA N L+PL+LGAPD+AFP
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 267 *DFDSYPPPL 296
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 109 bits (262), Expect = 7e-23
Identities = 54/77 (70%), Positives = 58/77 (75%)
Frame = +1
Query: 514 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 693
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 694 VYILILPGFGIISHIIS 744
VYILI+PGFGIIS IS
Sbjct: 244 VYILIIPGFGIISTTIS 260
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGNDQIYNTIVTAHAXXXXXXXXX 182
KDIG LY EL PG I ++Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL LG PD+ FP
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFP 96
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 107 bits (257), Expect = 3e-22
Identities = 54/79 (68%), Positives = 60/79 (75%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+ LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGH
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGH 267
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILI+PGFGIIS +IS
Sbjct: 268 PEVYILIIPGFGIISTVIS 286
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 431 ISS 439
ISS
Sbjct: 182 ISS 184
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGNDQIYNTIVTAHAXXXXXXXXX 182
KDI LY EL PG I ++Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+P+++G PD+AFP
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFP 122
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 102 bits (244), Expect = 1e-20
Identities = 48/63 (76%), Positives = 52/63 (82%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGH
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGH 237
Query: 688 PEV 696
P++
Sbjct: 238 PKL 240
Score = 87.8 bits (208), Expect = 3e-16
Identities = 48/88 (54%), Positives = 50/88 (56%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 431 ISSXXXXXXXXXXXXXXXXXXXSFDQYP 514
ISS SFDQ P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 81.0 bits (191), Expect = 3e-14
Identities = 47/98 (47%), Positives = 50/98 (51%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AELG PGSLIG+DQIYNTIVTAHA
Sbjct: 9 HKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVM 68
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVPL+LGAPD+AFP F PP L
Sbjct: 69 PIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 99 bits (238), Expect = 6e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 738
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 329 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/78 (57%), Positives = 57/78 (73%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 688 PEVYILILPGFGIISHII 741
PEVYILI+P FG++S I+
Sbjct: 259 PEVYILIVPVFGVVSQIV 276
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.088
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ N Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/78 (57%), Positives = 57/78 (73%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGH
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGH 258
Query: 688 PEVYILILPGFGIISHII 741
PEVYILI+P FG++S I+
Sbjct: 259 PEVYILIVPVFGVVSQIV 276
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.088
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ N Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1
Query: 583 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTIS 285
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 418
PR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 419 HLAGISS 439
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 56.8 bits (131), Expect = 5e-07
Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGNDQIYNTIVTAHAXXXXXXXXX 182
KDIGTLY EL PG I N+Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N L+PL++G PD+AFP F PP L
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/93 (54%), Positives = 58/93 (62%)
Frame = -2
Query: 295 KGGG*ESKSYIIYSGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SF 116
K GG + GNA+SGAP++ GTNQFPNPP KA AVT+ L I SF
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 115 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 17
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = -1
Query: 671 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGIDQM 498
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G+ M
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -3
Query: 438 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 271
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +1
Query: 514 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 693
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 694 VYILILPGFGIISHII 741
VYI++LP FG+IS I+
Sbjct: 246 VYIILLPVFGLISTIV 261
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 431 ISS 439
ISS
Sbjct: 158 ISS 160
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 102 GSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
G L G+ Q YN ++T+H N +P++ G PD+ FP
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFP 98
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 93.9 bits (223), Expect = 4e-18
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHIL 261
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 431 ISS 439
+SS
Sbjct: 157 MSS 159
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 14 HKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVM 73
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +PL++ D++ P
Sbjct: 74 PTSIGGLGNWFIPLMIKIKDLSMP 97
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 93.1 bits (221), Expect = 7e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +1
Query: 577 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 41.1 bits (92), Expect = 0.029
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 427
PRIN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 428 GISS 439
G++S
Sbjct: 160 GVAS 163
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
I +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGH
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGH 250
Query: 688 PEVYILILPGFGIISHII 741
PEVY++ILP FGIIS +
Sbjct: 251 PEVYVIILPVFGIISEAV 268
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXX 176
HK IGT Y EL +PG G+ Q+YN+++T H
Sbjct: 21 HKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFL 80
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL+LGAP++AFP
Sbjct: 81 VMPILIGGFGNWMLPLMLGAPEMAFP 106
Score = 33.5 bits (73), Expect = 5.8
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+N + F + G G+ T YPPLS S+D I LH G
Sbjct: 106 PRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVG 164
Query: 431 ISS 439
I S
Sbjct: 165 IGS 167
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 89.4 bits (212), Expect = 8e-17
Identities = 43/60 (71%), Positives = 46/60 (76%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG
Sbjct: 14 PRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAG 73
Query: 431 ISS 439
+ S
Sbjct: 74 VXS 76
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 87.0 bits (206), Expect = 4e-16
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +1
Query: 607 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIA 236
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +1
Query: 526 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 705
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 706 ILPGFGIISHIIS 744
ILPGFGIIS ++S
Sbjct: 253 ILPGFGIISLLLS 265
Score = 41.1 bits (92), Expect = 0.029
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+N +E G+GTG T+YPPLS+++++ G +D IF L AG
Sbjct: 103 PRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAG 160
Query: 431 ISS 439
I+S
Sbjct: 161 IAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 83.4 bits (197), Expect = 5e-15
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +1
Query: 505 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 684
S+ LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFG
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFG 223
Query: 685 HPEVYILILPGFGIISHII 741
HPEVY++ILP FG+ S I
Sbjct: 224 HPEVYVVILPVFGLFSSSI 242
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 332 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/59 (69%), Positives = 44/59 (74%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 684
IPLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 431 ISS 439
+SS
Sbjct: 156 LSS 158
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/99 (37%), Positives = 47/99 (47%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIG+LY EL +PGS++G+D +YN IVTAHA
Sbjct: 13 HKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPLY 299
N VPL++GAPD+AFP F PP L+
Sbjct: 73 PTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 82.6 bits (195), Expect = 9e-15
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +1
Query: 505 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 684
S+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYS 250
Query: 685 HPEVYILILPGFGIISHII 741
HP VYI+ILP FG+IS +I
Sbjct: 251 HPAVYIMILPFFGVISEVI 269
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
IPLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGH
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGH 256
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYI+ LP G++S I++
Sbjct: 257 PEVYIIFLPAVGMVSSIVA 275
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F FGH
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGH 259
Query: 688 PEVYILILPGFGIISHII 741
PEVYILILPGFG+IS +I
Sbjct: 260 PEVYILILPGFGMISEVI 277
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 431 ISS 439
ISS
Sbjct: 155 ISS 157
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/99 (36%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L G+ Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+ LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 431 ISS 439
+SS
Sbjct: 138 VSS 140
Score = 66.1 bits (154), Expect = 9e-10
Identities = 35/70 (50%), Positives = 39/70 (55%)
Frame = +3
Query: 87 ELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE*II 266
ELG PGS IGNDQ+YN +VTAHA N LVPL+LGAPD+AFP
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 267 *DFDSYPPPL 296
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 77.4 bits (182), Expect = 4e-13
Identities = 35/49 (71%), Positives = 36/49 (73%)
Frame = +3
Query: 606 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFSRK 752
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSK 55
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 76.6 bits (180), Expect = 6e-13
Identities = 40/78 (51%), Positives = 47/78 (60%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV + AF A LL DR+ T FF P GGD +L+QHLF FFGH
Sbjct: 199 MPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGH 258
Query: 688 PEVYILILPGFGIISHII 741
PEVYILILP GIIS ++
Sbjct: 259 PEVYILILPTMGIISEVL 276
Score = 33.5 bits (73), Expect = 5.8
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HK IG +Y +LG P + +YN + T H
Sbjct: 31 HKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLM 90
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +VPL++GA D+AFP
Sbjct: 91 PLNVGLG-NYMVPLMIGARDMAFP 113
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQ 241
Query: 688 PEVYILIL 711
I++L
Sbjct: 242 TVATIIML 249
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PGS L GN Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GA D AFP
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFP 96
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 33.9 bits (74), Expect = 4.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 99 PGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
PG + + + YN ++T H N L+PL++GA D+AFP
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFP 53
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLIL 312
Score = 33.9 bits (74), Expect = 4.4
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIG LY EL + + +YN ++T+H
Sbjct: 68 HKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGT 127
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +PL++ A D+AFP
Sbjct: 128 PMIAAFG-NYFIPLLIDADDMAFP 150
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFG 684
+PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 207 MPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYS 265
Query: 685 HPEVYILILPGFGIISHIIS 744
HP VYI++LP FG++S +++
Sbjct: 266 HPAVYIMVLPSFGVMSEVVA 285
Score = 37.1 bits (82), Expect = 0.47
Identities = 23/84 (27%), Positives = 30/84 (35%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HK IG ++ EL PG I + YN T H
Sbjct: 42 HKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMI 101
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL+LGA D+AFP
Sbjct: 102 PAIPAVFGNFMLPLMLGAKDVAFP 125
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 424
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 425 AGISS 439
GISS
Sbjct: 165 LGISS 169
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF 672
+PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 214 LPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLF 273
Query: 673 *FFGHPEVYILILPGFGIISHIIS 744
FGHPEVYI+ILP +GI+ ++S
Sbjct: 274 WIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYIL 343
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIG LY EL +PG + ++ YN+++T+H
Sbjct: 94 HKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFAT 153
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GA D+AFP
Sbjct: 154 PIIAAFS-NYLIPLLIGADDMAFP 176
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIV 419
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +1
Query: 577 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 738
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 431 ISS 439
ISS
Sbjct: 144 ISS 146
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/84 (44%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AEL PG+L+G+DQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GAPD+AFP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFP 84
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 633
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 684
+PLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 41.9 bits (94), Expect = 0.016
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PG L GN+Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL++GA D AFP
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAFP 96
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 738
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 739 ISQ 747
I +
Sbjct: 268 IQR 270
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 431 ISS 439
ISS
Sbjct: 155 ISS 157
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/99 (36%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L G+ Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLF + + + +++ DR T+FF+P GG+ ++++HLF FGH
Sbjct: 190 LPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGH 249
Query: 688 PEVYILILPGFGIISHII 741
PEVYILILP FGI S +I
Sbjct: 250 PEVYILILPAFGIFSEVI 267
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = +1
Query: 505 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 684
++PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWN 245
Query: 685 HPEVYILIL 711
HPEV I+ L
Sbjct: 246 HPEVKIICL 254
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +2
Query: 254 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 433
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 434 SS 439
SS
Sbjct: 162 SS 163
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL N GS L GN Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 180 XXXXXXXXXN*LVPLILGAPDIAF 251
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/78 (43%), Positives = 43/78 (55%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV TA + +R T FFD A GG P+L+Q LF FFGH
Sbjct: 179 MPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGH 238
Query: 688 PEVYILILPGFGIISHII 741
PEVYILILP G++S ++
Sbjct: 239 PEVYILILPAMGLVSELL 256
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 10/62 (16%)
Frame = +1
Query: 589 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 738
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 739 IS 744
IS
Sbjct: 298 IS 299
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FGH
Sbjct: 201 MPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGH 260
Query: 688 PEVYILILPGFGIISHII 741
PEVYILILP GIIS +I
Sbjct: 261 PEVYILILPAMGIISEVI 278
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+FV AV + +F A +L DR FF A GDPIL+QHLF FFGH
Sbjct: 204 MPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGH 262
Query: 688 PEVYILILPGFGIISHII 741
PEVYI+ +P G++S II
Sbjct: 263 PEVYIIFIPALGMVSSII 280
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQ 258
Query: 688 --PEVYILIL 711
P + I+I+
Sbjct: 259 IWPIIIIIII 268
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 39.5 bits (88), Expect = 0.088
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ N Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+F + + + A +L DR L +DPA GG +L+QHLF FFGH
Sbjct: 207 MPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGH 265
Query: 688 PEVYILILPGFGIISHII 741
PEVY+L LP FGI+S II
Sbjct: 266 PEVYVLALPFFGIVSEII 283
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/84 (26%), Positives = 33/84 (39%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HK +G +Y AEL PG +++ +N + T H
Sbjct: 38 HKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGT 97
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL +GAPD+AFP
Sbjct: 98 PIVWGFA-NYVLPLQIGAPDVAFP 120
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 66.9 bits (156), Expect = 5e-10
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+ H
Sbjct: 200 LPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSH 259
Query: 688 PEVYILILPGFGIISHII 741
P VYI++LP +IS ++
Sbjct: 260 PAVYIMVLPAMAVISEVV 277
Score = 37.5 bits (83), Expect = 0.35
Identities = 22/85 (25%), Positives = 32/85 (37%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HK IG ++ EL PG I + YN + T H
Sbjct: 35 HKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMI 94
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE 257
N L+P+++GA D+AFP+
Sbjct: 95 PAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+F A+ I A A +L +R+ FF GGDP+L+QHLF FFGH
Sbjct: 207 MPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGH 266
Query: 688 PEVYILILPGFGIISHII 741
PEVYI+ LP G++S I+
Sbjct: 267 PEVYIIFLPAAGLVSMIV 284
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 66.5 bits (155), Expect = 7e-10
Identities = 55/181 (30%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 87 ELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE*II 266
ELG PGSL+ +DQ+YN +VTAH N LVPL+LGAPD+AFP
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 267 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 446
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 447 XXXXXXXXXXXXXXXXXXXXNTLICMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 623
T IC+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 624 F 626
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 386 GRSVDLAIFSLHLAGISS 439
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPIL 657
+PL + A ITA A +L+ DR+L TSFF AG GG P+L
Sbjct: 233 LPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVL 292
Query: 658 YQHLF*FFGHPEVYILILPGFGIISHIIS 744
+QHLF F GHPEVYI+++P GI S +I+
Sbjct: 293 FQHLFWFLGHPEVYIVLIPALGITSEVIA 321
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 732
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +1
Query: 589 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVIS 267
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKD GTL AELG PG+L+G+DQ N IVTAHA
Sbjct: 13 HKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFP 96
Score = 36.7 bits (81), Expect = 0.62
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 367
PR+NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPI 654
+PL + A+ ITA A ++L DR + T FF P AGGG P+
Sbjct: 219 LPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPL 278
Query: 655 LYQHLF*FFGHPEVYILILPGFGIISHIIS 744
L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 279 LWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ H
Sbjct: 191 MPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSH 250
Query: 688 PEVYILILPGFGIISHIIS 744
P VY+++LP GI++ + S
Sbjct: 251 PTVYVMLLPYLGILAEVAS 269
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/84 (26%), Positives = 30/84 (35%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HK IG +Y +L P + + YN I+T H
Sbjct: 24 HKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFII 83
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +VPL+LGA D+A P
Sbjct: 84 QAGLTGFGNFVVPLMLGARDVALP 107
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 726
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 727 ISHII 741
+SHI+
Sbjct: 302 VSHIL 306
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/78 (41%), Positives = 45/78 (57%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+F A+ + A A +L +R + FF GGDP+L+QHLF FFGH
Sbjct: 266 MPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGH 325
Query: 688 PEVYILILPGFGIISHII 741
PEVYI+ LP G++S I+
Sbjct: 326 PEVYIIFLPAAGMVSMIV 343
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKN 256
Query: 688 PEVYILILPGFGI 726
P V ILI GI
Sbjct: 257 P-VLILIWLTSGI 268
Score = 39.5 bits (88), Expect = 0.088
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGNDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ N Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 63.3 bits (147), Expect = 6e-09
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = +3
Query: 510 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 686
T ICM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 94 TFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 62.9 bits (146), Expect = 8e-09
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 415
PR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 577 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVS 304
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 42/79 (53%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+F IT A+ +L DR FF GG P+L+ +LF +GH
Sbjct: 221 MPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGH 280
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYI+ILP FGI S IIS
Sbjct: 281 PEVYIVILPAFGIFSEIIS 299
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 589 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATML 300
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 601 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGND-QIYNTIVTAHAXXXXXXXX 179
HK +G LY EL G I +D +YNT + H
Sbjct: 14 HKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQ 73
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N +PL++GA D+AFP
Sbjct: 74 IPALTGFFANYFIPLMIGAKDVAFP 98
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 589 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTS 303
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 317 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 589 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +1
Query: 592 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 744
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GNDQIYNTIVTAHAXXXXXXX 176
HKDIGTLY EL PG+ I GN Q+YN ++TAHA
Sbjct: 14 HKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFM 73
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N VP+++G+PD+AFP F PP L
Sbjct: 74 VMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/79 (39%), Positives = 39/79 (49%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 688 PEVYILILPGFGIISHIIS 744
PEVYILILP FG+ S I S
Sbjct: 305 PEVYILILPAFGVYSEIFS 323
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
I LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH
Sbjct: 14 INLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGH 73
Query: 688 PEVYILIL 711
+V LIL
Sbjct: 74 TDVLFLIL 81
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 687
+P+F ++ T+ A + + L S F+P GG P+LYQ F F+ H
Sbjct: 199 MPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSH 258
Query: 688 PEVYILILPGFGIISHIIS 744
P VY+++LP GI + + S
Sbjct: 259 PAVYVMLLPYLGIGAEVAS 277
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/99 (36%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L G+ Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 53.6 bits (123), Expect = 5e-06
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDPI 654
+P+ + + ITA + + DR T FF P+G GG P+
Sbjct: 222 LPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPL 281
Query: 655 LYQHLF*FFGHPEVYILILPGFGIISHIIS 744
L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 282 LWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +1
Query: 487 K*YII*SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 666
K Y + ++PLFV AV A G +LL ++ S++ GG +++++
Sbjct: 204 KGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWEN 262
Query: 667 LF*FFGHPEVYILILPGFGIISHIIS 744
LF +FGHPEVY+L+LPG G + +S
Sbjct: 263 LFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 431 ISS 439
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 654
IP+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 655 LYQHLF*FFGHPEVYILILPGFGIIS 732
L+ HLF FFGHPEVYI+ P G+++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMA 277
Score = 33.5 bits (73), Expect = 5.8
Identities = 25/84 (29%), Positives = 31/84 (36%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGNDQIYNTIVTAHAXXXXXXXXX 182
HKDIG LY EL + G+ + YN V+ H
Sbjct: 22 HKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFIS 81
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL +GA D+AFP
Sbjct: 82 PFAFGFA-NYLVPLQIGADDLAFP 104
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +1
Query: 676 FFGHPEVYILILPGFGIISHIIS 744
FFGHPEVYILILPGFG+ISHI++
Sbjct: 2 FFGHPEVYILILPGFGMISHIVA 24
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 522 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 674
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 359 PLSSNIAHRGRSVDLAIFSLHLAGISS 439
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 46.8 bits (106), Expect = 6e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 663 TFILIFWTS*SLYFNFTRIWYNFSYYFSRK 752
+ ++IFW+S SLYFN IWYNF YY++ K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSK 31
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 676 FFGHPEVYILILPGFGIISHI 738
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL N GS L GN Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 180 XXXXXXXXXN*LVPLILGAPDIAF 251
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 691 EVYILILPGFGIISHIISQE 750
EVYILILPGFG+ISHIISQE
Sbjct: 155 EVYILILPGFGMISHIISQE 174
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 38.7 bits (86), Expect = 0.15
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGNDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PG+ L GN Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N L+PL++GA D++F F PP L
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.62
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 619 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 741
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 36.7 bits (81), Expect = 0.62
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +1
Query: 256 NK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 420
NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.9 bits (79), Expect = 1.1
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +3
Query: 507 NTLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 686
+T I M +Y+ TT S S +N N SKL++I+ S PN I ILI T
Sbjct: 85 DTSILMKNPNYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRT 144
Query: 687 S*SLYFNFTRI 719
L+ N T I
Sbjct: 145 PSGLHSNSTSI 155
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 4.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 640 GGDPILYQHLF*FFGHPEVYILILPGF 720
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 5.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 646 DPILYQHLF*FFGHPEVYILILPGF 720
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,535,555
Number of Sequences: 1657284
Number of extensions: 9835120
Number of successful extensions: 22054
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 21025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21976
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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