Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120113.Seq
(763 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 0.87
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 24 1.5
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 23 2.0
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 23 2.0
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 23 2.0
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 23 2.7
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 23 3.5
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 22 4.6
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 22 4.6
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 24.6 bits (51), Expect = 0.87
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 598 LNSCFISFSSSVWCTVGSVCS 536
++SC FSSS WC + S
Sbjct: 135 VSSCHQGFSSSTWCNYSAYSS 155
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 500 FRVASRRVKFVVWPILNK 447
F +A++ FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 500 FRVASRRVKFVVWPILNK 447
F +A++ FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 500 FRVASRRVKFVVWPILNK 447
F +A++ FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 500 FRVASRRVKFVVWPILNK 447
F +A++ FVVWPI+ +
Sbjct: 232 FAIAAQATGFVVWPIIEQ 249
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.8 bits (49), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 146 TTYEQACINISKENRVKHGDPLYLSPQTILLDKIGVNSCSCAPRCTTRRSCKI 304
T E IN N KH D I DK+G +C C P+ T ++C+I
Sbjct: 410 TNCEIDTINECDSNPCKHLD-------AICQDKLGDYACYCPPK-HTGKNCEI 454
Score = 21.4 bits (43), Expect = 8.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 236 LDKIGVNSCSCAPRCTTRRSCKIGFTNTC 322
LDK+G C C P R C+ G N C
Sbjct: 276 LDKVGGFECKCPPGFVGPR-CE-GDINEC 302
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 23.4 bits (48), Expect = 2.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -1
Query: 124 NTYCLFIIYIF 92
+TYCLF++++F
Sbjct: 289 STYCLFLLFVF 299
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 23.4 bits (48), Expect = 2.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -1
Query: 124 NTYCLFIIYIF 92
+TYCLF++++F
Sbjct: 289 STYCLFLLFVF 299
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 23.4 bits (48), Expect = 2.0
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -1
Query: 124 NTYCLFIIYIF 92
+TYCLF++++F
Sbjct: 289 STYCLFLLFVF 299
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 708 FALFVESPRVVVNKFNL 758
F L V+ PR+VV+ FN+
Sbjct: 32 FFLAVQYPRIVVSTFNI 48
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 395 PSRAISMRPRRCCTPKGICS 454
P+RA+ P +C P CS
Sbjct: 149 PNRALDCDPTQCVLPDCFCS 168
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 182 ENRVKHGDPLYLSPQ 226
EN +GDP Y+SP+
Sbjct: 439 ENNHYNGDPNYISPE 453
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 182 ENRVKHGDPLYLSPQ 226
EN +GDP Y+SP+
Sbjct: 387 ENNHYNGDPNYISPE 401
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,100
Number of Sequences: 336
Number of extensions: 3540
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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