Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120113.Seq
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133677-1|AAI33678.1|  194|Homo sapiens KRTAP10-3 protein protein.    33   1.5  
AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated prot...    33   1.5  

>BC133677-1|AAI33678.1|  194|Homo sapiens KRTAP10-3 protein protein.
          Length = 194

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +2

Query: 263 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTPK 442
           SC P C  + SC+      CC S+P ++  C     +    +P+  + +  +P  CC P 
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCKPVCCKP-ICCVP- 127

Query: 443 GICS 454
            +CS
Sbjct: 128 -VCS 130


>AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +2

Query: 263 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTPK 442
           SC P C  + SC+      CC S+P ++  C     +    +P+  + +  +P  CC P 
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCKPVCCKP-ICCVP- 127

Query: 443 GICS 454
            +CS
Sbjct: 128 -VCS 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,958,115
Number of Sequences: 237096
Number of extensions: 2033831
Number of successful extensions: 8831
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8826
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)