Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120111.Seq
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.88 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 272 NCPNIVIIIALERKNIQD*NNTKILYSC 189
           NCP  +I++AL    IQ+     IL++C
Sbjct: 264 NCPRFLIMLALSYTVIQEVMLFTILWNC 291


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
 Frame = -1

Query: 357 HHNIFFAIHID------ESFFSKTILKLVSRTIVKLSKYCNY 250
           ++ +FF +++        ++F KT  K    T++K +KYCN+
Sbjct: 287 YNTLFFIVYVSLLLGPHPTYFGKTGRK----TVLKTNKYCNF 324


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 508 HFNNYESEENQPKITQCFY 564
           +FN   SEEN+ K TQ  Y
Sbjct: 307 NFNKSSSEENEGKTTQLDY 325


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 508 HFNNYESEENQPKITQCFY 564
           +FN   SEEN+ K TQ  Y
Sbjct: 307 NFNKSSSEENEGKTTQLDY 325


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 119 CTAGKVLFSIGKICLWTI 172
           C    V+ +IG +C+W+I
Sbjct: 43  CYTIGVIITIGCLCIWSI 60


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 366 GAQRTRNVEKSLSLSRTKDVKEVI 437
           GA      EKS S+ + K+VKE I
Sbjct: 198 GAIGAYGPEKSASIPKKKEVKEEI 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,990
Number of Sequences: 336
Number of extensions: 4548
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)