Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120111.Seq
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    27   0.63 
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.9  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   7.8  

>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 587 EQIWSYKNLVIEVEELRTIPFDSNNIEHEE 676
           + + SYK   I V++L TIP D     HEE
Sbjct: 13  DDMLSYKKPQIFVDQLLTIPNDGKPFTHEE 42


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 180 MTTTGIQYFGVVLILNIFSL*SNDNYNIW 266
           M+  G+   GVVL+L++  L     +N W
Sbjct: 1   MSLLGVLLLGVVLLLSLAYLFLRSKHNYW 29


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 243 SNDNYNIWTVLQWYVR 290
           S D YN W V Q Y R
Sbjct: 601 SGDGYNAWAVYQPYCR 616


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,066
Number of Sequences: 2352
Number of extensions: 16590
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)