Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120111.Seq
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061047-1|AAL28595.1|  316|Drosophila melanogaster LD01482p pro...    71   2e-12
AE014297-563|AAF54060.1|  316|Drosophila melanogaster CG10068-PA...    71   2e-12

>AY061047-1|AAL28595.1|  316|Drosophila melanogaster LD01482p
           protein.
          Length = 316

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +3

Query: 282 YVRPILKWFLRKTTRLCELQRICYGDIAGAQRTRNVEKSLSLSRTKDVKEVISFLD 449
           Y+RP +KWFL   TRL ELQRICYG  AGA RT  VE+SL+LS+   ++ ++  LD
Sbjct: 14  YIRPFIKWFLHAFTRLSELQRICYGAKAGASRTSQVERSLTLSKRPQIRRLVLDLD 69



 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 26/70 (37%), Positives = 44/70 (62%)
 Frame = +2

Query: 482 QLSQFIGSIISIIMRVKKINPRLHSAFISPFRSCLEQIWSYKNLVIEVEELRTIPFDSNN 661
           +L  F      I+M+ K+I   +H  F   F +C+  IW Y+ L+ +VE+LR   +DS+N
Sbjct: 79  ELLDFAPRAARIVMQAKRIKNNVHPDFARLFGTCVTSIWGYRRLMHQVEQLRAEKYDSDN 138

Query: 662 IEHEEKLLKI 691
           ++HE+KLL++
Sbjct: 139 LDHEQKLLRL 148



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 687 KLWSLLVPDETLESRISKQWQYIGFR 764
           +LW LL+PD  L  R++KQWQ IGF+
Sbjct: 147 RLWQLLMPDTPLTGRVTKQWQDIGFQ 172


>AE014297-563|AAF54060.1|  316|Drosophila melanogaster CG10068-PA
           protein.
          Length = 316

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +3

Query: 282 YVRPILKWFLRKTTRLCELQRICYGDIAGAQRTRNVEKSLSLSRTKDVKEVISFLD 449
           Y+RP +KWFL   TRL ELQRICYG  AGA RT  VE+SL+LS+   ++ ++  LD
Sbjct: 14  YIRPFIKWFLHAFTRLSELQRICYGAKAGASRTSQVERSLTLSKRPQIRRLVLDLD 69



 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 26/70 (37%), Positives = 44/70 (62%)
 Frame = +2

Query: 482 QLSQFIGSIISIIMRVKKINPRLHSAFISPFRSCLEQIWSYKNLVIEVEELRTIPFDSNN 661
           +L  F      I+M+ K+I   +H  F   F +C+  IW Y+ L+ +VE+LR   +DS+N
Sbjct: 79  ELLDFAPRAARIVMQAKRIKNNVHPDFARLFGTCVTSIWGYRRLMHQVEQLRAEKYDSDN 138

Query: 662 IEHEEKLLKI 691
           ++HE+KLL++
Sbjct: 139 LDHEQKLLRL 148



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 687 KLWSLLVPDETLESRISKQWQYIGFR 764
           +LW LL+PD  L  R++KQWQ IGF+
Sbjct: 147 RLWQLLMPDTPLTGRVTKQWQDIGFQ 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,718,761
Number of Sequences: 53049
Number of extensions: 682003
Number of successful extensions: 1421
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)