Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120106.Seq
(774 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopoly... 177 3e-43
UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8; N... 100 5e-20
UniRef50_A0EYZ5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q23DM8 Cluster: Kelch motif family protein; n=1; Tetrah... 34 3.4
UniRef50_Q9ZRJ0 Cluster: Retrotransposon Tto1 DNA; n=17; Eukaryo... 33 6.0
UniRef50_Q4QJJ0 Cluster: Protein kinase, putative; n=3; Leishman... 33 6.0
UniRef50_Q80LK4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q67RK6 Cluster: Putative coenzyme A ligase; n=1; Symbio... 33 7.9
>UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 40.9 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 353
Score = 177 bits (431), Expect = 3e-43
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +2
Query: 254 IKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNGAYR 433
+KCIDFDYYG C+K MFCNLQTNLQKCVDQHYAELDVLTRQ+YMS+PLV+LKCYQNGAYR
Sbjct: 72 LKCIDFDYYGFCAK-MFCNLQTNLQKCVDQHYAELDVLTRQVYMSDPLVVLKCYQNGAYR 130
Query: 434 LNGQIDLHLNRHIKCIKTQYNDEFD 508
LNGQI+LHLNRHIKCIKTQYNDEFD
Sbjct: 131 LNGQINLHLNRHIKCIKTQYNDEFD 155
Score = 169 bits (410), Expect = 9e-41
Identities = 82/85 (96%), Positives = 82/85 (96%)
Frame = +1
Query: 508 LVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLLG 687
LVRFALQIDITSA GVDEYTDN VKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSL G
Sbjct: 156 LVRFALQIDITSADGVDEYTDNGVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLFG 215
Query: 688 NEYHVLVSSLQRVLNDQLMCLLKDI 762
NEYHVLVSSLQRVLNDQLMCLLKDI
Sbjct: 216 NEYHVLVSSLQRVLNDQLMCLLKDI 240
Score = 145 bits (351), Expect = 1e-33
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +3
Query: 36 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 215
MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA
Sbjct: 1 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 60
Query: 216 VTCHIDDD 239
VTCHIDDD
Sbjct: 61 VTCHIDDD 68
>UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8;
Nucleopolyhedrovirus|Rep: Putative early 40.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 355
Score = 100 bits (239), Expect = 5e-20
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +1
Query: 508 LVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRPFNADRCIKNFSLLG 687
L+RFALQ+++ + GVDEY D V + FNVFFVN+R MK P +RC++ ++ G
Sbjct: 158 LLRFALQVELKALNGVDEYVDQKVIVDRGAAVFNVFFVNIRAMKGPLTMERCVRTLAVFG 217
Query: 688 NEYHVLVSSLQRVLNDQLMCLLKDI 762
+ Y V+VS LQ V+NDQ+MCLLKDI
Sbjct: 218 DAYRVVVSPLQSVINDQIMCLLKDI 242
Score = 93.1 bits (221), Expect = 7e-18
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +3
Query: 36 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 215
M+R+ +Q+ G LPYITT D+EDRLR++I AKA F K CFEAVV + GLFVL+GGAA
Sbjct: 1 MDRVASQIYSGALPYITTMDMEDRLRNRIAAKAGAKFFKACFEAVVADKSGLFVLSGGAA 60
Query: 216 VTCHIDDD 239
CHI DD
Sbjct: 61 TACHIGDD 68
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 IKCIDFDYYGLCSKKM-FCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNGAY 430
+KC+DFDYY + + LQ LQ CV + L L + + M + L ++KC+QNGA+
Sbjct: 72 LKCLDFDYYNATQEWLQLARLQQRLQACVQDNLEILSRLAQSVRMQDDLFVVKCFQNGAF 131
Query: 431 RLNGQIDLHLNRHIKCIKTQYNDEFDWL 514
NG + L ++ ++T +N EFD L
Sbjct: 132 CFNGPVQARLVPCVETVRTSFNGEFDLL 159
>UniRef50_A0EYZ5 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 393
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 72 LPYITTKDIEDRLRDKIVAKAKLAF---IKDCFEAVVCENGGLFVLTGGAAVTCHIDDDD 242
LPYI+ K + D + + I+++ F + DC E ++ ++ GGAA+ H+ DD+
Sbjct: 14 LPYISKKAVNDAMCNYILSQMPKMFYSEVYDCVERILHRQK--CIVKGGAAIAAHLQDDN 71
>UniRef50_Q23DM8 Cluster: Kelch motif family protein; n=1; Tetrahymena
thermophila SB210|Rep: Kelch motif family protein -
Tetrahymena thermophila SB210
Length = 1372
Score = 34.3 bits (75), Expect = 3.4
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -2
Query: 716 NDDTNT*YS-FPRSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYAL 540
N DTN YS +S+ S G F +++ TLK+S + I Q VY +L
Sbjct: 898 NQDTNILYSHLIKSDLSEFGGSLANGNFF-NNISQPTLKESAFLNIFGQSGVYYLNLKSL 956
Query: 539 VIS-----ICSANLTNQTHRCTVF--LCILYGGLSAN 450
++ S N+T +H C +F + GGLS N
Sbjct: 957 ELNHKQPIALSGNITKYSHACNIFDGKVFVSGGLSQN 993
>UniRef50_Q9ZRJ0 Cluster: Retrotransposon Tto1 DNA; n=17;
Eukaryota|Rep: Retrotransposon Tto1 DNA - Nicotiana
tabacum (Common tobacco)
Length = 1338
Score = 33.5 bits (73), Expect = 6.0
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 79 ILRQRILKIACAIKLWLKQSWHLSKIVSKP*FAKTEVYSC*L--EARL*HAISTTTTTKA 252
IL RI++ A KLWL Q ++ K++ + KT+ SC L RL S +T +
Sbjct: 1045 ILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDER 1104
Query: 253 HKMHR 267
KM R
Sbjct: 1105 RKMER 1109
>UniRef50_Q4QJJ0 Cluster: Protein kinase, putative; n=3;
Leishmania|Rep: Protein kinase, putative - Leishmania
major
Length = 432
Score = 33.5 bits (73), Expect = 6.0
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +2
Query: 539 QAHTASTSIPTTA---LK*PQPRCLSTCF-LSTCAL*NDPSTRTAA 664
+ TASTS+P T+ L+ P RC+S F +T A N ST TAA
Sbjct: 376 EEETASTSVPVTSRSGLRTPNSRCVSVPFGTNTSAFSNSSSTTTAA 421
>UniRef50_Q80LK4 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 382
Score = 33.1 bits (72), Expect = 7.9
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +1
Query: 466 PYKMHKNTVQR*V*LVRFALQIDITSAYGVDEYTDNCVKITTAPLSFNVFFVNVRIMKRP 645
P+KM + + L+RF+ + + S + T N +K T + +++F+++ I K
Sbjct: 169 PFKMTTSQIDNDT-LMRFSYNVHMKSKSQIWNITYNKMKRLTF-IPMDIYFMDIIIKKEA 226
Query: 646 FNADRCIKNFSLLGN---EYHVLVSSLQRVLNDQLMCLLKD 759
F A R F+ + + +V + +++ L DQL CL+ D
Sbjct: 227 F-AIRAPPEFAFHIDSMFDTYVCIQNIEHALADQLECLMYD 266
>UniRef50_Q67RK6 Cluster: Putative coenzyme A ligase; n=1;
Symbiobacterium thermophilum|Rep: Putative coenzyme A
ligase - Symbiobacterium thermophilum
Length = 445
Score = 33.1 bits (72), Expect = 7.9
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 212 GCDMPYRRRRLQKRIKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSN 391
G P R+RL++ C FD+YG+ + LQ+ + H+AE VL I N
Sbjct: 225 GAGEPITRKRLERLYGCPAFDFYGITEVGPLLAGECRLQQGL--HWAEDHVLVEVI---N 279
Query: 392 PLVMLKC 412
P M C
Sbjct: 280 PATMAPC 286
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,953,993
Number of Sequences: 1657284
Number of extensions: 13629648
Number of successful extensions: 37300
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37293
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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