Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120105.Seq
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF142325-1|AAD33884.1|  103|Drosophila melanogaster male accesso...    32   1.1  
AE014297-3858|AAF56513.1|  103|Drosophila melanogaster CG4986-PA...    32   1.1  

>AF142325-1|AAD33884.1|  103|Drosophila melanogaster male accessory
           gland protein protein.
          Length = 103

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -3

Query: 753 VSCKYKQIDRVLLEKYIYIIRDFSSILIGFLILCDILKVSGITP 622
           +SC  KQ+ R+ +     +++   +  +  L+LC +L  +G+TP
Sbjct: 7   ISCYLKQLQRISIVSIHQVVKMHGTHFLILLLLCGVLGSNGVTP 50


>AE014297-3858|AAF56513.1|  103|Drosophila melanogaster CG4986-PA
           protein.
          Length = 103

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -3

Query: 753 VSCKYKQIDRVLLEKYIYIIRDFSSILIGFLILCDILKVSGITP 622
           +SC  KQ+ R+ +     +++   +  +  L+LC +L  +G+TP
Sbjct: 7   ISCYLKQLQRISIVSIHQVVKMHGTHFLILLLLCGVLGSNGVTP 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,136,892
Number of Sequences: 53049
Number of extensions: 653873
Number of successful extensions: 1141
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)